| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3393 |
|---|
| Symbol | |
|---|
| ID | 4572544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 3744631 |
|---|
| End bp | 3745557 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 639757452 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_903043 |
|---|
| Protein GI | 118581793 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCA GCGTAATAAT GTCTGCCTAC AACGCAGAAA AGCACCTGAC GAAATCCATT
GAGTCGGTGC TGGGGCAGAC CTACAGCGAC TTTGAATTCC TCATTGTCAA TGACGCATCG
ACCGATGACA CTCCGGCCCT TTTGCAGAAA TACCAGAGAT CGGATAATCG CATCGCACTA
CTGCATAACC GGTCAAACAT TGGATTGACG CGTTCACTGA ATCTTGCCAT ACAGCATGCA
CGGCATAACA TCATAGCTCG ACAGGACGCT GATGATATTT CTCATCCTGA GCGGTTTTCC
AAGCAAATTG ACTTCTTGAA GACACATGGC GAAGTAATGC TACTTGGGAC CGCAGGGCAG
TTAATTGATG ATTCGGGCCG GATTCTAAGG AATGAACCGG TGATATCCGG AAGTGTGCGA
CTCAAGAAGC GTCTGCAGAG ATGTAACCAG TTTATCCACG GGTCAGTAAT GATGCGGCGG
CAATGCCTCA ACGTCATTGG CCTTTATAGA GAGGAATTTG TAAGCGCCCA AGACTACGAC
CTCTTTCTAC GGATTTCAGA ACAGTACGCG GTAGACAATC TTCCTGTTCC TCTCTATCAG
TATCGGATCA GCCCTTCAAC AGTCTCCATA GCCAAAAGCA GGCAGCAGCA GGTTTGTGCT
CTGATTGCCC AGGAGGCCTC AAGGGACCGG CGCTCCGGCA TGCCAAACAA CTGGGACCAG
CTCATGTACG ATGCCTATAG TCGTAGAATC AATTCAAAGC GTTTTCATAA AACGATTGAA
TGCAATCTCG CATTAACAAA GGGAAGAAAC AGTTTACTCG CTGGCGAGCA TTTAACGGCA
AAAAAAGAAT TCAGCAAAGC TTTTGTGGTC AGACCGTCTC TAAAAACACT CTACCATTTA
GTCCGTAGTT ATGTCTGCTG CCGATAA
|
|---|
| Protein sequence | MKISVIMSAY NAEKHLTKSI ESVLGQTYSD FEFLIVNDAS TDDTPALLQK YQRSDNRIAL
LHNRSNIGLT RSLNLAIQHA RHNIIARQDA DDISHPERFS KQIDFLKTHG EVMLLGTAGQ
LIDDSGRILR NEPVISGSVR LKKRLQRCNQ FIHGSVMMRR QCLNVIGLYR EEFVSAQDYD
LFLRISEQYA VDNLPVPLYQ YRISPSTVSI AKSRQQQVCA LIAQEASRDR RSGMPNNWDQ
LMYDAYSRRI NSKRFHKTIE CNLALTKGRN SLLAGEHLTA KKEFSKAFVV RPSLKTLYHL
VRSYVCCR
|
|---|
| |