| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3293 |
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| Symbol | |
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| ID | 4572582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | - |
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| Start bp | 3629597 |
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| End bp | 3631006 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639757351 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
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| Protein accession | YP_902943 |
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| Protein GI | 118581693 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAGCA TTGCGGAGAT AGCCGCTGCC ACCGCGGGCG GCTTCCAGGG TGACCGGTCG
GCCCGGGTGA GCGGGGTCTC CACCGATTCG CGCACGGTCG CGGCTGGCCA GCTGTTCGTG
CCGCTTAGGG GAGAGCGCTT CGACGGCCAC GACTTCATCC CCCAGGTGGC TGCCAAGGGA
GTTGCCGCCG TGCTGGCTGA CCAGAGCTTC GACGGGGAGA TTCCCCCCGG ACTGACCGTT
GTCAGGGTCG TGGATACGCT GGTCGCCCTG GGTGACCTGG CAGCCGCCTA CCGCAGGCGC
TTTGACCTGC CGCTGGTCGG TATCACCGGC AGCAACGGCA AGACCACCAC CAAGGAGATG
CTGGCAACCA TCCTGGAGCA GACCGGACCG GGGCTGAAGA CGGCCGGCAA CCTGAACAAC
CTGATCGGCT TGCCGCAGAT GCTGTTCAGG CTTGATGCCT CCCATGGCTG GGCCGTGCTG
GAGATGGGCA TGAGCGAGCC GGGCGAGATC GACCGCCTGG CCGAGGTCGC CGCCCCCCAG
ACCGGTATCG TGCTCAACGC CTGTCCCGCA CACCTGGAGA GCATGGGGAG CGTTGAAGGG
GTGGCCAGGG CAAAGGGAGA GCTGTTGCTG CGCCTCCCCG CCGGAGGGTG CGCCATCATC
AATGCCGACG ATCCCCTGAT CGCCGGACAG CCATCACCCC CAGGGGTGCG GCGACTCACC
TTCGGCCTGG GCGACGCCGA CGTGCGCGCC ACGGAGATCA CCTCGCTGGG AATCGGCGGC
CAGAGCTTCC TGCTTCACCT GGGAGAAATT GTCCTTCCCG TGGTCTTGTG GTCATACGGC
AGGCACGCCG TCTATAACGC CCTGGCAGCG GCTGCGGCCG CCCATGGCTT GGGTATCGCG
GCCGAACTGA TCCAGAGTGG CCTGGAACGC TTCCGCCCCT ACGACAAACG CTTCCAGCTG
GAAGATGTGG GCGGCCTGGT GCTGATCGAT GACAGCTACA ACGCCAACCC CGCCTCCATG
GAGGCGGCCC TGACCACCCT GGGGGAGCTG AAGGGGGGAG GGCGGGCCTT CGTGGCCCTG
GGGGACATGC TGGAGATGGG GAGCAACGAA GCGGAGCTGC ACCGTGCCCT GGGAGTACGG
GCCGCCGCGG TGGCGGACCG GCTCTACCTC TGCGGCCCCT TGATGGCCCA CGCGGCGGTG
GGGGCCTTGT CGGCCGGAAT GGTTGAGGAG CAGGTCATGC GCATCCCGGA CCACGACGAG
ATCGCTGCCA GCATCCTGCG TCAGGCGCGT CCGGGAGATT TCGTGCTGGT CAAGGGATCG
CGCGGCATGC GCATGGAAAA GGTCGCCGAG GCGATCCGGG GCCGGACGTT CCTAGGGAGA
CGGCCCCCTG TGGCTGACCC CACAGCGTAA
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| Protein sequence | MFSIAEIAAA TAGGFQGDRS ARVSGVSTDS RTVAAGQLFV PLRGERFDGH DFIPQVAAKG
VAAVLADQSF DGEIPPGLTV VRVVDTLVAL GDLAAAYRRR FDLPLVGITG SNGKTTTKEM
LATILEQTGP GLKTAGNLNN LIGLPQMLFR LDASHGWAVL EMGMSEPGEI DRLAEVAAPQ
TGIVLNACPA HLESMGSVEG VARAKGELLL RLPAGGCAII NADDPLIAGQ PSPPGVRRLT
FGLGDADVRA TEITSLGIGG QSFLLHLGEI VLPVVLWSYG RHAVYNALAA AAAAHGLGIA
AELIQSGLER FRPYDKRFQL EDVGGLVLID DSYNANPASM EAALTTLGEL KGGGRAFVAL
GDMLEMGSNE AELHRALGVR AAAVADRLYL CGPLMAHAAV GALSAGMVEE QVMRIPDHDE
IAASILRQAR PGDFVLVKGS RGMRMEKVAE AIRGRTFLGR RPPVADPTA
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