| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3196 |
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| Symbol | |
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| ID | 4573263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | - |
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| Start bp | 3512995 |
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| End bp | 3513942 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639757255 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_902847 |
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| Protein GI | 118581597 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCTGG TATTCCCCGT GGATTCCGAG CCGGTCAGGC TAGACCTGTT TCTCAGTAGC
CAGTTGGCCA GCGAGACCCG CTCCACCATT CAGCGCCTGA TCGAATCCGG CAACATCATG
GTTGACGGCA GAGAGGTGCG CCCCTCGCTC AAGCTCAAGG GGGGCGAATC CATCTCGATA
CAGCTGCCGG AACCGGTTGC TGCCAGGCCG CTGCCCGAAT CCATACCGCT GGAAGTGCTC
TACGAGGACG GGGATCTGAT CGTGATCAAC AAGCCGGCCG GCATGGTGGT GCATCCGGGG
CCGGGCAACA GCTCCGGCAC GCTGGTGAAT GCCCTGCTGG CCCACTGCAC GGATCTCTCC
GGCATTGGTG GGGAACTGCG CCCCGGCATC GTGCACCGTC TGGACAAGGG GACATCCGGG
GTGATGGTGG TCGCCAAGAA CGACCGCAGC CACCAGGCGC TGTCGGCCCA GTTCAGCGTG
CACTCCATCA AGCGCATCTA TCAGGCTTTG GTCTACGGCA GCCCGCAACA GGACTCGGGG
AGGCTGGAGG GGCAGATCGG CCGCCATCCC ACGGACCGGC TGCGGCGCTC GGGCCTGGCG
CGGCAGGGGA AGCATGCCGT CACCCGCTGG CGGGTGCGCG GTCGCTACGG CCGAATTTGC
CTGATGGAGC TGCGGCTGGA GACCGGCCGG ACCCACCAGA TCCGGGTGCA TATGAGCGAG
GCCGGCTTTC CGCTGCTGGG CGACCCGCTC TACCCCGACG GCGGGCGCTT CAACAACCTA
ACCGACCCCA GGTTGCGCAA ACTGATCACG ACCCTGGCCA GGCAGGCGCT GCATGCCCGC
ACCCTGGGGT TTATCCACCC TGCCAGCGGC AACTACCTGG AGTTTTCCGT TGATATGCCG
GCGGACATGG CCGCCCTGCT GGAATACCTG GAGGGGTCGC CCCTGTAG
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| Protein sequence | MNLVFPVDSE PVRLDLFLSS QLASETRSTI QRLIESGNIM VDGREVRPSL KLKGGESISI
QLPEPVAARP LPESIPLEVL YEDGDLIVIN KPAGMVVHPG PGNSSGTLVN ALLAHCTDLS
GIGGELRPGI VHRLDKGTSG VMVVAKNDRS HQALSAQFSV HSIKRIYQAL VYGSPQQDSG
RLEGQIGRHP TDRLRRSGLA RQGKHAVTRW RVRGRYGRIC LMELRLETGR THQIRVHMSE
AGFPLLGDPL YPDGGRFNNL TDPRLRKLIT TLARQALHAR TLGFIHPASG NYLEFSVDMP
ADMAALLEYL EGSPL
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