Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_3100 |
Symbol | |
ID | 4573651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 3388234 |
End bp | 3389898 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639757158 |
Product | 2-nitropropane dioxygenase, NPD |
Protein accession | YP_902751 |
Protein GI | 118581501 |
COG category | [R] General function prediction only |
COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
TIGRFAM ID | [TIGR02814] PfaD family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGTATC AGTCACCGGG TACCACCACA ATGGAACACC CCCTTCTGGG GTGGTGTCGG CCAGACGCCG CCCCCTGCTC CGGAACAGAC CTGGCCGATG GCCTTCGCCG CCTTCACCGG CCGCTCTTCA TCGCCGCCCA GGACGATTCC CTGACCCCCC TCTCCAGGCC ACGGCTGCTG GCGGACAGTG AGCCACCACC GAGCGGCGCC CTGCCGCTGG TCGGCTTCTC CCCCCCATGT CCCCCTGAAA ACCTGGGCGA TCCCTCCTTC TGCGGGGAAC TGGGAATCCG CTACCCCTAC CTAGGCGGTT CCATGGCCAA GGGGATCAGT TCGGTGGCCA TGGCGCTGGC CCTGGGCAGG GCAGGCATGC TCGGCTTCTT CGGCGCCGCG GGCCTGACCA TCTCCCAGGT GGAAGAGGCC GTCAACCAGC TCACGTCCAG CAAGGTTCCC TTCGGCTGCA ACCTGATCCA TTCGCCCCAC GACCCGGAAC TGGAGCAGAC CCTGGTTCAG CTCTACCTGG AGCGGAACGT GCGGCTGATG GAGGCATCGG CCTTCATGAA GCTGACCCTG CCGCTGGTGC GCTACCGCCT GGCCGGCATC CGCCGTAATG ACGACGGCAG CATCCACACC CCCAACCGGA TCATCGCCAA GGTCTCCCGA GAGGAGTTGG CGGCACGGTT CTTCGCCCCG CCACCCGAGG CGTTTCTTCA CGAGCTGGTG GCGGACAAAG AGATCACCCA CGAACAGGCG GAACTGGCTG CCCATATCCC CATGGCCCAG GAGATCACCG CCGAGGCCGA TTCCGGCGGG CACACCGACA ACCGGCCAGC CAACGCCCTC TTCCCCACCA TCGCATCCCT GGCGGCCCGC ATGCAGGCCG AGCACAACTA TGACCTGAGG CTGCGCGTCG GCCTGGGGGG AGGCATCTCC ACACCTGCCG CGGCTGCGGC GGCCTTTGTC ATGGGCGCGG CCTACGTCAT GACCGGCTCG GTCAACCAGG CATGCCGGGA GTCGGGAACC TCGGACGAGG TGCGCGCCAT GCTGGCCGAA ACCCGCCAGG CAGACGTGAC CATGGCCCCC TCGGCCGACA TGTTCGAGAT GGGGGTCAAC GTGCAGGTAC TCAAGCGCGG CACCATGTTC CCCATGCGCG CCCAGAAGCT GTACGAGATC TACCGCGCCT GGCCGAGCCT GGAGCAGATC CCGACTCTCG AGCGTGAAAA GCTGGAAAAG ACCATCTTCC AGGCGCCGCT GGAGCAGATC TGGAAGATCA CCCGCGACTA CTTTCTTAAG CGCGCGCCGC AGCAGGTCAG CCGCGCCGAG CAGGACCCCA AACACCGCAT GGCACTGGTC TTCCGCTGGT ACCTGGGACA GGCGGCCCAC TGGGCCAAGG ATGGCGACAG ATCGCGCAGG ATCGACTACC AGATCTGGTG CGGCCCGGCC ATGGGCGCCT TCAACGAATG GGTCGCCGAC TCCTTCCTGG AGCCCCCGGC CAACCGCGAC GTGGTAACGG TCGGCCTGAA CATCCTCTTC GGCGCAGCGC TCATGACCCG CGCCAGCGTA CTGCGCTGCC AGGGGCTCCC CATCCCCCGG GAAGCCCTGA CCACGAAACC GCTCGAACTC GCACATATCA AGGAGTATCT ATCAGGTGAA AACGCTCGAT CCTAA
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Protein sequence | MSYQSPGTTT MEHPLLGWCR PDAAPCSGTD LADGLRRLHR PLFIAAQDDS LTPLSRPRLL ADSEPPPSGA LPLVGFSPPC PPENLGDPSF CGELGIRYPY LGGSMAKGIS SVAMALALGR AGMLGFFGAA GLTISQVEEA VNQLTSSKVP FGCNLIHSPH DPELEQTLVQ LYLERNVRLM EASAFMKLTL PLVRYRLAGI RRNDDGSIHT PNRIIAKVSR EELAARFFAP PPEAFLHELV ADKEITHEQA ELAAHIPMAQ EITAEADSGG HTDNRPANAL FPTIASLAAR MQAEHNYDLR LRVGLGGGIS TPAAAAAAFV MGAAYVMTGS VNQACRESGT SDEVRAMLAE TRQADVTMAP SADMFEMGVN VQVLKRGTMF PMRAQKLYEI YRAWPSLEQI PTLEREKLEK TIFQAPLEQI WKITRDYFLK RAPQQVSRAE QDPKHRMALV FRWYLGQAAH WAKDGDRSRR IDYQIWCGPA MGAFNEWVAD SFLEPPANRD VVTVGLNILF GAALMTRASV LRCQGLPIPR EALTTKPLEL AHIKEYLSGE NARS
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