Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_3089 |
Symbol | gatB |
ID | 4573962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 3378162 |
End bp | 3379601 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639757146 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
Protein accession | YP_902742 |
Protein GI | 118581492 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.231418 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATACC AAGCCGTTAT CGGACTTGAG GTTCACGTCC AGCTCAAGAC CGACTCCAAG ATATTCTGCG GATGCTCCAC CTCCTTCGGA TCCGACCCCA ACTCCCAAAC CTGCCCGGTC TGTCTGGGGC TGCCCGGGGC ACTGCCGGTG CTGAACAAAA AAGTGGTGGA ATTCGCCATC AAGGCCGGTC TGGCCACCAA CTGCTCCATC ACCCAGCGCA GCATCTTCGC CCGCAAGAAC TACTTCTATC CGGACCTGCC CAAGGGATAC CAGATCAGCC AGTTCGAGGA TCCCGTCTGT CAGTGGGGCT GGCTGGATAT CGAGCTGAAC GGCGAAACCA AGCGCATCGG CATCACCCGC ATCCACATGG AAGAAGACGC CGGCAAGCTG GTGCACGCTG ACGTCCCCGA GCTGGAGGAC GGGTCGGGCG TGGACCTGAA CCGGGCCTGC ACACCGCTTC TGGAGGTGGT CTCCGAACCG GACCTGCGCT CATCCGACGA GGCGGTCAGC TATCTCAAGC AGCTGCACCA GATCGTGACC TGGCTCGGTA TCTGCGACGG CAACATGGAG GAGGGGAGCT TCCGCTGCGA CGCCAATGTC TCGGTCATGG AGCAGGGGGC CGAGAAATTC GGCACCCGCG CCGAGATCAA GAACATCAAC TCCTTCAGGT TCGTCAAGCA GGCCATCGAA TACGAAATCC AGCGCCAGAT CGACCTGATC GAGGATGGCG GCACGGTTGT CCAGGAAACA CGCCTGTTCG ATCCCGACAA CGGCGTGACC CGCTCCATGC GCAGCAAGGA GGAGGCCCAC GACTACCGCT ACTTCCCCGA TCCCGACCTG GTGCCGCTGG TAATCGACGA CGACTGGATC CAGCGGGTGC GCCAGGGCCT GCCCGAACTG CCCGAGCACA AGAAGCAGCG CTTCATGAGC GAGTTCAGCA TCCCCGCCTA TGACGCCGAA GTGCTCACCG CCAGCCGTCC CCTGGCCGAA TACTATGAGG AGTGCGTGGC CTGCCACCAC GACGGCAAGG CGGTTTCCAA CTGGGTCATG GGCGAGGTCA CCCGCGGACT GAACGACAGC GGACTCTCCA TAGAAAACTG CCCGGTCACC CCCCGGCTAC TGGGGGGACT GCTCAAGCTG ATGGATAACG GCACCATCTC CGGCAAGATC GCCAAGACGG TCTTCGACGA GATGTGGAAG AGCGGCAAAG AGCCGGCCGT CATCGTGGAG GAGCAGGGAC TGGTCCAGGT TTCCGACAAC GGAGCCATCC TGGCCATCAT CGACGAAATC ATGGCCAAAA ACCAGGGACA GGTGGCTGAG TACCGCAGCG GCAAGGACAA GTTGTTCGGG TTCTTTGTCG GCCAGGTCAT GAAGGCCAGC AAGGGCAAGG CCAACCCCTC CCTGGTTAAC GAGTTGCTGC TGGAGAAGCT GAAGGGATAG
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Protein sequence | MKYQAVIGLE VHVQLKTDSK IFCGCSTSFG SDPNSQTCPV CLGLPGALPV LNKKVVEFAI KAGLATNCSI TQRSIFARKN YFYPDLPKGY QISQFEDPVC QWGWLDIELN GETKRIGITR IHMEEDAGKL VHADVPELED GSGVDLNRAC TPLLEVVSEP DLRSSDEAVS YLKQLHQIVT WLGICDGNME EGSFRCDANV SVMEQGAEKF GTRAEIKNIN SFRFVKQAIE YEIQRQIDLI EDGGTVVQET RLFDPDNGVT RSMRSKEEAH DYRYFPDPDL VPLVIDDDWI QRVRQGLPEL PEHKKQRFMS EFSIPAYDAE VLTASRPLAE YYEECVACHH DGKAVSNWVM GEVTRGLNDS GLSIENCPVT PRLLGGLLKL MDNGTISGKI AKTVFDEMWK SGKEPAVIVE EQGLVQVSDN GAILAIIDEI MAKNQGQVAE YRSGKDKLFG FFVGQVMKAS KGKANPSLVN ELLLEKLKG
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