Gene Ppro_3089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_3089 
SymbolgatB 
ID4573962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp3378162 
End bp3379601 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content61% 
IMG OID639757146 
Productaspartyl/glutamyl-tRNA amidotransferase subunit B 
Protein accessionYP_902742 
Protein GI118581492 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) 
TIGRFAM ID[TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.231418 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATACC AAGCCGTTAT CGGACTTGAG GTTCACGTCC AGCTCAAGAC CGACTCCAAG 
ATATTCTGCG GATGCTCCAC CTCCTTCGGA TCCGACCCCA ACTCCCAAAC CTGCCCGGTC
TGTCTGGGGC TGCCCGGGGC ACTGCCGGTG CTGAACAAAA AAGTGGTGGA ATTCGCCATC
AAGGCCGGTC TGGCCACCAA CTGCTCCATC ACCCAGCGCA GCATCTTCGC CCGCAAGAAC
TACTTCTATC CGGACCTGCC CAAGGGATAC CAGATCAGCC AGTTCGAGGA TCCCGTCTGT
CAGTGGGGCT GGCTGGATAT CGAGCTGAAC GGCGAAACCA AGCGCATCGG CATCACCCGC
ATCCACATGG AAGAAGACGC CGGCAAGCTG GTGCACGCTG ACGTCCCCGA GCTGGAGGAC
GGGTCGGGCG TGGACCTGAA CCGGGCCTGC ACACCGCTTC TGGAGGTGGT CTCCGAACCG
GACCTGCGCT CATCCGACGA GGCGGTCAGC TATCTCAAGC AGCTGCACCA GATCGTGACC
TGGCTCGGTA TCTGCGACGG CAACATGGAG GAGGGGAGCT TCCGCTGCGA CGCCAATGTC
TCGGTCATGG AGCAGGGGGC CGAGAAATTC GGCACCCGCG CCGAGATCAA GAACATCAAC
TCCTTCAGGT TCGTCAAGCA GGCCATCGAA TACGAAATCC AGCGCCAGAT CGACCTGATC
GAGGATGGCG GCACGGTTGT CCAGGAAACA CGCCTGTTCG ATCCCGACAA CGGCGTGACC
CGCTCCATGC GCAGCAAGGA GGAGGCCCAC GACTACCGCT ACTTCCCCGA TCCCGACCTG
GTGCCGCTGG TAATCGACGA CGACTGGATC CAGCGGGTGC GCCAGGGCCT GCCCGAACTG
CCCGAGCACA AGAAGCAGCG CTTCATGAGC GAGTTCAGCA TCCCCGCCTA TGACGCCGAA
GTGCTCACCG CCAGCCGTCC CCTGGCCGAA TACTATGAGG AGTGCGTGGC CTGCCACCAC
GACGGCAAGG CGGTTTCCAA CTGGGTCATG GGCGAGGTCA CCCGCGGACT GAACGACAGC
GGACTCTCCA TAGAAAACTG CCCGGTCACC CCCCGGCTAC TGGGGGGACT GCTCAAGCTG
ATGGATAACG GCACCATCTC CGGCAAGATC GCCAAGACGG TCTTCGACGA GATGTGGAAG
AGCGGCAAAG AGCCGGCCGT CATCGTGGAG GAGCAGGGAC TGGTCCAGGT TTCCGACAAC
GGAGCCATCC TGGCCATCAT CGACGAAATC ATGGCCAAAA ACCAGGGACA GGTGGCTGAG
TACCGCAGCG GCAAGGACAA GTTGTTCGGG TTCTTTGTCG GCCAGGTCAT GAAGGCCAGC
AAGGGCAAGG CCAACCCCTC CCTGGTTAAC GAGTTGCTGC TGGAGAAGCT GAAGGGATAG
 
Protein sequence
MKYQAVIGLE VHVQLKTDSK IFCGCSTSFG SDPNSQTCPV CLGLPGALPV LNKKVVEFAI 
KAGLATNCSI TQRSIFARKN YFYPDLPKGY QISQFEDPVC QWGWLDIELN GETKRIGITR
IHMEEDAGKL VHADVPELED GSGVDLNRAC TPLLEVVSEP DLRSSDEAVS YLKQLHQIVT
WLGICDGNME EGSFRCDANV SVMEQGAEKF GTRAEIKNIN SFRFVKQAIE YEIQRQIDLI
EDGGTVVQET RLFDPDNGVT RSMRSKEEAH DYRYFPDPDL VPLVIDDDWI QRVRQGLPEL
PEHKKQRFMS EFSIPAYDAE VLTASRPLAE YYEECVACHH DGKAVSNWVM GEVTRGLNDS
GLSIENCPVT PRLLGGLLKL MDNGTISGKI AKTVFDEMWK SGKEPAVIVE EQGLVQVSDN
GAILAIIDEI MAKNQGQVAE YRSGKDKLFG FFVGQVMKAS KGKANPSLVN ELLLEKLKG