Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_3014 |
Symbol | |
ID | 4574304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 3292901 |
End bp | 3294412 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639757068 |
Product | lysyl-tRNA synthetase |
Protein accession | YP_902669 |
Protein GI | 118581419 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.270584 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATTGC CGAGAAAGGC CCCGATCACA ATGGAAGAAC TGAGCGAACT GCTGCTCCAG AGAAGACGCA AGGTCGACAC CCTCTGGGAA GCCGGCATTA ATCCCTATCC CAACGATTTC AGACCAGAGC ACACCTCAGC CGACGTCTTT GCCGCCTATG GCGATAAGGA GCAGGTAGAC GCAGAGCATG ACATATTCGT CGTGGCGGGG CGCATCCTGG CGCGCCGCTC CTTCGGCAAG GCAGCCTTCA TCAAGATCCA GGACCGCAAG GGCCGCCTGC AGCTGTACAT CAAGAAGGAC GAGATTGGCG AACAGGCCTT CGCGGACTTC GAAACCTTCG ACATCGGCGA CATCGTCGGC GTTGAAGGTT TCCCCTTCCG CACCAAGACC AACGAACTCT CCCTGCACGC GAAGAAGATC CGCCTGCTGG TCAAGTCACT GCACCCCCTG CCGGAAAAGT TCCACGGCCT GACCGACGTG GAAACCCGCT ACCGCCAGCG CTACGTCGAC CTGATCGTCA ACCCGGAATC GCGGGAGATA TTCATCAAGC GCTCCCGCAT CATCAACCTG ATCCGCGCCT TCATGACCGC CCGGGACTTC CTGGAGGTGG AAACCCCCAT GATGCAACGG ATCCCGGGAG GCGCCACGGC CAAGCCATTC ATCACCCATC ACAACGCCCT GGACATGCAG CTCTTCCTGC GCATCGCGCC GGAACTGTAC CTGAAACGGC TGGTCGTGGG GGGCATGGAG CGGGTCTTCG AGATCAACCG CAACTTCAGG AACGAGGGGA TCTCCGTCCG CCACAACCCG GAATTCACCA TGATGGAGTT CTACCAGGCC TACGCCACCT ACGAGGACCT GATGAACTTC ACCGAGGAAC TGTTCTGCCA TGTGGCCCAA GAGGTCCTGG GAACCCTGGA CTTCGTCAAC CAGGGCAGGG AGATCAGTTT CCAGCGCCCC TGGAAGCGCC TGACCGTGCG GGATGCCATC CTGGAGTACG GCGACATCGA CGCCAAAAAA CTGGATGATC GCGACCTGGC CCTGATCTAT GCCCGCAGCA TCGGCCTGGA CCTGCCCGAC GACATCGGCC ATGGCAAGCT CATGATGGAG ATCTTCGAGG AAGTGGCCGA GCACAAGCTG ATCCAGCCCA CCTTCGTCAC CGCCTACCCC ACCGAGGTAT CGCCGCTCTC CCGCAAGAAC GACCACAACC CGGACATCGT GGACCGCTTC GAGCTGATCG TCGGCGGCAG GGAGATCGCC AACGCCTTCT CCGAGCTGAA CGATCCGGTG GACCAGAAGG AGCGCTTCCT CTCCCAAGTG GCCGAAAAGG CCAAGGGGGA CGAAGAGGCC CACTACATGG ACGAGGACTA CATCCGAGCC CTGGAATACG GCCTCCCCCC CACCGCCGGC GAAGGGATTG GTATCGACAG GCTGGTGATG CTGTTGACCG ACTCGGCCTC GATCCGCGAC GTCATCCTCT TCCCGCAGCT GCGAAAGGAG AAACGGGATT AG
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Protein sequence | MTLPRKAPIT MEELSELLLQ RRRKVDTLWE AGINPYPNDF RPEHTSADVF AAYGDKEQVD AEHDIFVVAG RILARRSFGK AAFIKIQDRK GRLQLYIKKD EIGEQAFADF ETFDIGDIVG VEGFPFRTKT NELSLHAKKI RLLVKSLHPL PEKFHGLTDV ETRYRQRYVD LIVNPESREI FIKRSRIINL IRAFMTARDF LEVETPMMQR IPGGATAKPF ITHHNALDMQ LFLRIAPELY LKRLVVGGME RVFEINRNFR NEGISVRHNP EFTMMEFYQA YATYEDLMNF TEELFCHVAQ EVLGTLDFVN QGREISFQRP WKRLTVRDAI LEYGDIDAKK LDDRDLALIY ARSIGLDLPD DIGHGKLMME IFEEVAEHKL IQPTFVTAYP TEVSPLSRKN DHNPDIVDRF ELIVGGREIA NAFSELNDPV DQKERFLSQV AEKAKGDEEA HYMDEDYIRA LEYGLPPTAG EGIGIDRLVM LLTDSASIRD VILFPQLRKE KRD
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