Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_3013 |
Symbol | |
ID | 4574303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 3290201 |
End bp | 3292801 |
Gene Length | 2601 bp |
Protein Length | 866 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639757067 |
Product | ribonuclease |
Protein accession | YP_902668 |
Protein GI | 118581418 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1530] Ribonucleases G and E |
TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000305018 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAGG CCGTAAGCAA AAAGATGCTG ATCAACGTCA TGCACCCCGA AGAGGCCCGC GTGGCCATCG TGCATGACGG ACGTCTGATG GAACTGAATA TAGAGATAAG CGGCAAGGAG CAGACCAAGG GAAACATCTA CAAAGGGGTC GTGCTGCGCG TGGAACCGGG GCTACAGGCC GCCTTCGTGG ACATCGGCCG CCCCAAGCCC GGCTTCCTGC AGATGGGCGA ACTGCACCCC GACTTCTGGC AGTGGCGGGA CGACGTGCCC GAGGAGCAGC GCAAGCGCCG TCCCCGCATC CAGGAGGTGC TGCGCCGCGG CCAGGAACTG GTGGTGCAGG TGGAGAAGGA CGAGCGCGAC AACAAGGGCT CGGCCCTGAC CAGCTACCTC TCCCTGCCGG GGCGCTACAT GGTGCTCATG CCGGGAAGCG ACTCCAGCGG CATCTCCCGC AAGGTGGAGC AGGAGAGCGT GCGCAAGCAG TTGAAAGAGA TCATGGCCGG GATGAGCATC CCCGAGGGGA TCGGCTATAT CGTACGCACC CAGGCGGTGG GGCGCACCCC CGAGGAACTG CAGAAGGACA TGGAAAACCT GCTGGCCATG TACGAGGGGA TCAAAAAGAG CGCCACCGAG ATAAAAGGGG CCGGCGAAAT CTACCGCGAC AAGGGGCTGA TCATCCGCTT CATCCGCGAC TACTTCTCCG ACGACATCGA CGAGGTGGTG GTGGACAGCA AGGAGGCCTT CAACGAGGCC AGGGACTTCT TCCGCGAAAC CATGCCGGGC TGCGAAAAGC TGGTCAAGCT GCACAAGGAG AAACGGCCGG TCTTCTCCCG CTTCCAGATC GAGGAGCAGA TCGACCAGAT CTACGAGAAG CGGGTATCGC TCCCCTCCGG CGGCTCCCTG ATCATCGAAC CGACCGAAGC CCTGGTCAGC ATCGACGTCA ACTCCGGGAA ATCCAGCGGC GAGCGGGGCA TCGAGGACAC CGCCTTCAAG ACCAACATGG AGGCTGCCGA AGAGGTGGCC CGCCAGTTAC GTCTGCGCGA CCTGGGCGGT CTGATCATGA TCGACTTCAT CGACATGCGC GACCGCAAAC ATAACCACGA GGTGGAGAAG ACCCTCAAGC AGGCCCTCAA GATGGACAAG GCACGGGTCA ACCTGGGGCG CATCTCCGAG TTCGGCATCC TGGAGATGTC CCGCCAGCGC ATCGCCAAGA CCTTGAACGA CGCCATCCAC CTGGCGTGCC CCCACTGCGA GGGGCGCGGC AAGGTCAAAT CGGTGGAGGC CATGGCGCTC TCCTTTCTGC GCAAGGTGCA TGGCGCGGCG GCCAAGGGAA ACGTATGCGA GGTGCATGGC GGCCTGCCGC TGGAAGTGGC CTACTACCTG CTCAACCGCA AGAAGCGGGA ACTGGCCCAG ATCGAAAATG ACTACGACAT CGAAGTAACG GTCAAGGGGA AGACATCCTT CCTGCTCAAC CAGATGGAGC TGGAGATCGT CAAACGAGAG AAAAAGCGGC CCGAAGAGCC GGCCAGGGAC GATGCGGACA ACGGAGAGGC GACCCAACCG GCGCTCGCCG TCGAGACCGT CGCTGCTGTG CCCCAGGAGG GGGAGCCATC CCCGGAAAAC GGGGCCACCG AAGGGGGCAA GAAGCGCAAA CGCCGTCGCA AGAAGAAGAA ATCAGCGACG GAGGGCACCG CGATACCCGG ACAGACGGAG GCAGAATCTG CAACAGAGCA GTCCGAAGAG GAGCATCCTC TGGACCAGGC GCCAGGGGAG CCCACTGCCG CCCGGCAGGC CGAGGAGCAC GAGGTGCCCG GTGCGCCAGC GGAGGAGCAG ACTGACGAAG TAACTACGGA ACCCACCGAG GAGGGTGAAG CGGCAGCGGC TCCCAAGAAA CGCAGACGTC GGCGCAGCCG CAAGGTGAGC AAAGGCGCCG AGGAATCGGC AACGGCCGAG GAAAGCGATG AGACGGCGTC GGCCGCGGAA CCGCTGGAAG TTGCCCCGGC GGAGCTGGCT GCGCCTGCCG AACCTCCGGC AGGGGAGACA GCGACGGAAC AACCGCAAGC GCCGGAGACC GTTCCGCTGG AGACGCGCTC CTTCGAGTCC GGCCCCCAGG AAGAGCCGGC CGTAGAAACG ACTGCAGTTG TCGCGGCAGC CGGGCCAACC GCTGTGGAGA CGACTCCAGA AGAGGAGAGC ACCACGCAAG AAGCCGTAGC CGCAGAAACC GCCACGGCCG AGGCTGCCTT GAAGCAGCTT GCCCCGCCCG AAGAGACTTC CGGTGAAATC GTCGCGCCGG AGCTCCTGAC AGCGGAACTC CTCCCGGAAC AGCCAGAAAC GCCGGAACCG GCGGCCAAAC CGAAGCGGGC CAGGGCGCCA CGGGCCAGGA AGAAGACCGT GGCAACGGAG GAACAGCAGG CCGTCGCAAC GACGGAGGCT GTTCCCGAGA GCGCTCCCGC CGAGGCCGAA CCAGCGGTAA AAAAACCGCG ACGGCGCACC GCGGCCAAGA AGAGCACACC CGCGGCAGAC ACGACCGCGG AGCCTGTTAC GGAAGCACCG AAACCGGCCC CACGGAAACG TCGCACCAAA AAAGACGAAC AAAACCAATG A
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Protein sequence | MSKAVSKKML INVMHPEEAR VAIVHDGRLM ELNIEISGKE QTKGNIYKGV VLRVEPGLQA AFVDIGRPKP GFLQMGELHP DFWQWRDDVP EEQRKRRPRI QEVLRRGQEL VVQVEKDERD NKGSALTSYL SLPGRYMVLM PGSDSSGISR KVEQESVRKQ LKEIMAGMSI PEGIGYIVRT QAVGRTPEEL QKDMENLLAM YEGIKKSATE IKGAGEIYRD KGLIIRFIRD YFSDDIDEVV VDSKEAFNEA RDFFRETMPG CEKLVKLHKE KRPVFSRFQI EEQIDQIYEK RVSLPSGGSL IIEPTEALVS IDVNSGKSSG ERGIEDTAFK TNMEAAEEVA RQLRLRDLGG LIMIDFIDMR DRKHNHEVEK TLKQALKMDK ARVNLGRISE FGILEMSRQR IAKTLNDAIH LACPHCEGRG KVKSVEAMAL SFLRKVHGAA AKGNVCEVHG GLPLEVAYYL LNRKKRELAQ IENDYDIEVT VKGKTSFLLN QMELEIVKRE KKRPEEPARD DADNGEATQP ALAVETVAAV PQEGEPSPEN GATEGGKKRK RRRKKKKSAT EGTAIPGQTE AESATEQSEE EHPLDQAPGE PTAARQAEEH EVPGAPAEEQ TDEVTTEPTE EGEAAAAPKK RRRRRSRKVS KGAEESATAE ESDETASAAE PLEVAPAELA APAEPPAGET ATEQPQAPET VPLETRSFES GPQEEPAVET TAVVAAAGPT AVETTPEEES TTQEAVAAET ATAEAALKQL APPEETSGEI VAPELLTAEL LPEQPETPEP AAKPKRARAP RARKKTVATE EQQAVATTEA VPESAPAEAE PAVKKPRRRT AAKKSTPAAD TTAEPVTEAP KPAPRKRRTK KDEQNQ
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