| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3003 |
|---|
| Symbol | |
|---|
| ID | 4574343 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 3276155 |
|---|
| End bp | 3277456 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639757057 |
|---|
| Product | xanthine/uracil/vitamin C permease |
|---|
| Protein accession | YP_902658 |
|---|
| Protein GI | 118581408 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2252] Permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAACGGT TCTTCCGCTT CGAGCGCTAC AATACCAGCT TTCGTCAGGA AACTCTGGCC
GGGGTGACCA CCTTCCTGAC CATGGCCTAC ATTATCATCG TCAACCCGGC CATCATGGAG
AACGCCGGCA TCCCCCGGGG AGCGTCGATC ACCGCCACCA TCCTGGCAGC TGTCATCGGT
ACGGTGATCA TGGCGCTCTG GGCGCGGCGC CCCTTTGCCA TCGCCCCCTA CATGGGGGAG
AACGCCTTCA TCGCCTTCGT GGTGGTCAAG GTGATGGGCT ACAGCTGGCA GGCTGCCCTA
GGGGGGGTGT TCATCGCCGG CGCGCTCTTC ACCTTGCTGA CCCTGTTCGG CATCCGCGGC
TGGCTGGCCG AGTCCATCCC CCTGTCCCTC AAGGCCGGCT TTGCCGTGGG GATCGGCCTG
TTTCTGACCT TCATCGGCCT GAACGAGACC GGCCTGGTGG TGTTGGGGGT TCCGGGAGCG
CCGGTCAGGC TGGGTAATCT GGGGGAGCCC TCCTGCCTGC TGGCGGTGGC CGGTTTCCTG
CTGGTGACGG CGCTCATGGC CCTCCGGGTG CGCGGCGCCC TTTTGATCGG CATCATGGCC
GCCACCCTGG GCTCCATAAG CCTGGGGCTT ACCCCCCTGC CGGACAGCAT TGCCAGCCTT
CCTCCGTCAC TGGAGCCGAT CCTGTTCAAG CTGGACATCG CCGGCGCGCT CTCGGTTTCG
TTCCTGCCGG TGGTGGCGGT GATCTTCATC ATGGCCTTCC TGGATACGGT GGGCACCCTG
ATCGGACTCT CCATGCGTGC CGACCTGCTG GACGAGAACG GCAACCTGCC GGAGATCGAG
CGCCCCATGT TGGCCGACTC CCTGGCCACC ATGGCCGCCC CGCTCCTGGG TACCTCCACT
ACCGGCGCCT ACATCGAGTC GGCCGCCGGT ATCGAGGAGG GGGGGCGCAC CGGTTTCTCG
GCCCTGGTTG TGGCGCTCCT CTTCCTGCTG TCGCTGTTCT TCGCCCCGCT CTTCACCATC
GTCCCTCCCC ACGCCTATGG CATCGCCCTG GTAGTGATCG GTTCCTTCAT GATCCGCCCC
ATCACCCGCA TCGATTTCGA CGATGTGACC GAGTTGGTGC CTGCCTTCCT GACCATCTGC
CTGATGGCGT TCACCTACAA TATCGGGGTG GGGATGACCG CGGGGATGAT CACCCATGTC
CTGCTCAAGC TGTTCACCGG CAGGGGGGGC GAGGTCAAGC CGGGCATGTG GGTGCTGGCG
CTTCTGTCGA TGCTCTTGTT CGTCTGCCTG CCCAAGCTCT GA
|
|---|
| Protein sequence | MKRFFRFERY NTSFRQETLA GVTTFLTMAY IIIVNPAIME NAGIPRGASI TATILAAVIG
TVIMALWARR PFAIAPYMGE NAFIAFVVVK VMGYSWQAAL GGVFIAGALF TLLTLFGIRG
WLAESIPLSL KAGFAVGIGL FLTFIGLNET GLVVLGVPGA PVRLGNLGEP SCLLAVAGFL
LVTALMALRV RGALLIGIMA ATLGSISLGL TPLPDSIASL PPSLEPILFK LDIAGALSVS
FLPVVAVIFI MAFLDTVGTL IGLSMRADLL DENGNLPEIE RPMLADSLAT MAAPLLGTST
TGAYIESAAG IEEGGRTGFS ALVVALLFLL SLFFAPLFTI VPPHAYGIAL VVIGSFMIRP
ITRIDFDDVT ELVPAFLTIC LMAFTYNIGV GMTAGMITHV LLKLFTGRGG EVKPGMWVLA
LLSMLLFVCL PKL
|
|---|
| |