| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2997 |
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| Symbol | |
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| ID | 4574337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | + |
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| Start bp | 3266389 |
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| End bp | 3269019 |
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| Gene Length | 2631 bp |
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| Protein Length | 876 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639757051 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_902652 |
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| Protein GI | 118581402 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGAA AGACCAAGGC AATCCTGCTG CTTGTCGCGC TCATCGCAGG TATTTCCTCG
TTTCTGTACC TCTCCTCCCA CCTGATCCTG CTCAAGAGCT TTTCCCAGCT TGAACAGGAC
TACACGTCTG AAAACGTGAG ACGGGCTCTC AACTCCATTG CCGACGACAT CCGGCAGATA
GACACGATCA CCAGCGACTA TGCCGGATGG GATGAGGCCT ACGCGTTCAT CGACAACGGA
AACAAAACCT TCAGCAGGTC AAACCTTGAC GACGCCATTT TCCCCAAGCT CCGCTTGAAT
ATCCTCGTCT ATGTCAGAAA TTCAGGCGCT ATCGTCTTTG CGAAGGCCTT CGATCTTCGT
ACGGGCACGG AATCACCGCT GCCCCCCTCC CTGGTGAAAC AGCTGACGGC GAACAGCCCG
CTTGTGCGCC ACACATCCAG CGACAGCGTG CTGTCCGGGG CGCTCCTGCT GCCGGAAGGT
CCGCTGCTGC TTGTATCGCG ACCGGTTCTG ACGAGTTCCT ATCAGGGACC AATCCACGGA
TCACTGATCA TGGGACGATT CCTCGGAACC GACGAAATCA GGCGCCTGGC AGATCTAAAC
CACCTTAACC TGTCCATCCT CCCCCTTAAC GCAGCCCGAC AATCATCGAA AAGCGCGACA
ATCCTGCCTC CCCTTTCGGC CACCAGGCCT ATCGCGGTCA TTCCCGGCAG CGGTGAAACC
ATCACCGGGT ATGGCCTGAT CAATGACATC CACGGCAAAC CGGCACTCAT CGCCCGGGTC
GACATGCGGC GCAAGATCTA CAGCCAGGGG GTGGACGCGG TCCAGTACTT CCTCTTCTGC
TTCCTGGGGT TCTGCCTGAT TTCCTCCCTG ACCGGCTATA TCCTGTACGC AAAGCTGCTC
GCCTCCCGCA AGGAACGCAA AGACACGGAA AAAAGATACC GATCCGTCAT CAGCCAGGCA
TCGGATATCA TTCTGCTCGT AGACATCGAC AGCAGGCGCA TCCTGGAAGC GAACCTCGCC
TTTCAGAGGC TTCTGAACTA TGCCCCCGAC AAGGCCACCC AGCTGACATT GTATGACATT
ATGGAGGACG ACCGCTCCGG GGTTGACTGG CGTATCAACC GGATACTTTC GGAAAAGGTC
TGCTTCCTGG GAGAACACAC GGTCAGAGCA GAGGACGGCA GCATGGTTGA GGTCGATCTC
AACGCCAACC TGGTTTCCTA TGGGGAGCAA CAGGTGATCT GCATGGTACT CAGGGACATT
TCCGAGAGGA AGCGCTTCGA AGGAGAGCTG ATGCACATGG CGCACCACGA TGCGCTGACC
GGGCTGCCAA ATCGCACGCT GTTTTTCGAT CGACTCAGAC AGGGGCTCTA CAAGAAGGAA
CGTTCCGGGA AGATGTTGGC TGTGATCTAC CTGGATCTGG ACCGGTTCAA AATCATCAAT
GACACCCTCG GCCATCACAC CGGAGACATG CTTCTCAAGG AGGTGGCAGA CAGACTGCGG
GGAGTCGTCC GCAAAGCCGA CACCATTTCC CGGCTGGGTG GAGACGAGTT CACCATCATC
ATCGATGAGA TCGCAACACC GGCGGACTCG CTCCTGGTTG CCGAGAAGAT ACTGCACGTC
TTTAGTGCGC CATTCCGCCT CGAAAAACAT GAGATGTTTA TCACGGCCAG CATGGGCGTA
ACCCTCTACC CGAACGATGG CGACACGGCG GAGAAACTGC TGAAGAACGC CGATACGGCC
ATGTATCACG CCAAGGAGGA GGGACGTAAC ACCTACCAGT TTTTTTCGGA GGAGATGAAC
TCCCGGGTCA GCGAGCGTCT CTCCATGGAG ACCGGCTTGA GGCATGCCCT GGCACGGAAT
GAATTCCTGC TCCACTACCA GCCGCGGGTC AACACGACAA CCGGCAGGAT CGTGGGGGTG
GAGGCACTGA TTCGCTGGCA GCAGCCGCAG AAGGGGCTGA TTCTGCCCGA CGCATTCATC
CCGCTGGCCG AGGAGACCGG GCTGATCATA CCGATTGGCG AGTGGGTACT CAGGAACACC
TGCACACAGG CCAGAGCCTG GCAGGAGGCC GGGTTTGCGC AGATGAGGAT CTCGGTCAAC
ATCTCGTGTC GGCAGTTCAC ACACGACAAC CTGCCCGACA CCATCCGGGG AATCTTGAGG
GAGACCGGTC TCCAGCCATC CTGCCTTGAA CTTGAGATCA CCGAGAGCGT CATCATGCTC
AACCCGGAGA GGGCCATCAG CCTGCTCAAC GAACTGAAGG AGATGGGCAT CTCCATCGCC
ATCGATGATT TCGGTACCGG CTACTCCTCC CTCTCCCTTC TGAAACGCCT CCCGGCAGAC
ATCCTGAAGA TTGACAAGAG TTTTGTCAGC GGCATTCCCG GAAACAAAAG TGACGAGACC
CTCGTGGCTA CCATTATCAA CCTGGGGCAC AACATGGGGC TTGGCCTGGT GGCGGAGGGG
GTCGAGAGAC AGGAGCAGCT GCACTTCCTG GAAGAGCGCA ACTGCCAGGA GGTACAGGGG
TACTACTTTA GCAAACCGCT GCCTGCGGAA ACACTACAGC CCCTCCTGAA AAACGGAACC
TATCCGGCGG CGGCAGGCAG GCAGCAGCCC ACAGACGCCA GGGATATCTG A
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| Protein sequence | MSRKTKAILL LVALIAGISS FLYLSSHLIL LKSFSQLEQD YTSENVRRAL NSIADDIRQI
DTITSDYAGW DEAYAFIDNG NKTFSRSNLD DAIFPKLRLN ILVYVRNSGA IVFAKAFDLR
TGTESPLPPS LVKQLTANSP LVRHTSSDSV LSGALLLPEG PLLLVSRPVL TSSYQGPIHG
SLIMGRFLGT DEIRRLADLN HLNLSILPLN AARQSSKSAT ILPPLSATRP IAVIPGSGET
ITGYGLINDI HGKPALIARV DMRRKIYSQG VDAVQYFLFC FLGFCLISSL TGYILYAKLL
ASRKERKDTE KRYRSVISQA SDIILLVDID SRRILEANLA FQRLLNYAPD KATQLTLYDI
MEDDRSGVDW RINRILSEKV CFLGEHTVRA EDGSMVEVDL NANLVSYGEQ QVICMVLRDI
SERKRFEGEL MHMAHHDALT GLPNRTLFFD RLRQGLYKKE RSGKMLAVIY LDLDRFKIIN
DTLGHHTGDM LLKEVADRLR GVVRKADTIS RLGGDEFTII IDEIATPADS LLVAEKILHV
FSAPFRLEKH EMFITASMGV TLYPNDGDTA EKLLKNADTA MYHAKEEGRN TYQFFSEEMN
SRVSERLSME TGLRHALARN EFLLHYQPRV NTTTGRIVGV EALIRWQQPQ KGLILPDAFI
PLAEETGLII PIGEWVLRNT CTQARAWQEA GFAQMRISVN ISCRQFTHDN LPDTIRGILR
ETGLQPSCLE LEITESVIML NPERAISLLN ELKEMGISIA IDDFGTGYSS LSLLKRLPAD
ILKIDKSFVS GIPGNKSDET LVATIINLGH NMGLGLVAEG VERQEQLHFL EERNCQEVQG
YYFSKPLPAE TLQPLLKNGT YPAAAGRQQP TDARDI
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