| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2635 |
|---|
| Symbol | |
|---|
| ID | 4574707 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 2862322 |
|---|
| End bp | 2863884 |
|---|
| Gene Length | 1563 bp |
|---|
| Protein Length | 520 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639756685 |
|---|
| Product | EmrB/QacA family drug resistance transporter |
|---|
| Protein accession | YP_902297 |
|---|
| Protein GI | 118581047 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.723891 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAACGA CCTCTGAAAA AAACGTCAAC AAATGGCTGA TCACCATCAC GGTCATGCTC
CCCACCATCA TGGAGATCAT CGACACCTCC GTGGCCAACG TGGCCCTGCC GCACATGCAG
GGGAGCCTGA ACGCCGGCAC GGACGAGATC ACCTGGGTGC TGACCTCCTA CCTGGTCAGC
AACGCCGTGG TGCTCCCCAT AACCGGCTGG CTGTCGCGCG TCTTCGGCCG CAAGCGTTTC
CTGATGACCT GCATCACCCT GTTCACCCTG GCATCGCTGC TCTGCGGCTC GGCCCCCACC
CTGGCAACCC TGATTCTGTT CCGCATCATC CAGGGGGCTG CCGGGGGTGC CCTGATTCCC
ATCAGCCAGG CCATCCTGAT GGAGACCTTT CCCCCCCGGG AGCGCGGCAT GGCCATGGCC
ATCTTCGGGG TGGGCGCCAT GTTCGGCCCC ATCGTCGGCC CGGCCCTGGG GGGCTGGATC
ACCGACAACC TGAACTGGCG CTGGATCTTC TACATCAACC TGCCCATCGG CATGATTGCC
CTGGTGATGT GCGGCCTGTT CATCTTCGAC CCCGCCTACC TGAAGCGGGG CGCACAAACC
ATGCGGATCG ACTACGGGGG ACTCGTGTTG CTCACCACCG GCATGGGCGC CCTGCAGGTG
GTGCTGGACA AGGGGCAGCA GGAGGACTGG TTCAACTCAT CCTTCATCAT CGCCTTCAGC
ATCATCATGG TGGTTTCCCT GGTCGCCCTG GTCTGGGTGG AGCTGACCCA TGACCATCCG
ATCATCAACC TGCGGCTGTT CAGGAACATC TCCTTCTCCG CCGGCAACTT CATCATGTTC
GTGGTCGGCT TCTGCCTCTA CAGCTCCATC ACCATGATCC CGCTCTTCCT GCAGAACCTG
ATGGGCTACT CTGCCACCGA CGCCGGCATG GTGCTGGCGC CGGGCGGCGT GGCAACCCTG
ATCACCATGC CGCTGGTGGG GCTCATGCTG CAGAAGCGGG ACGGCAGAAA GATCGTCTTC
CTTGGCCTGG TGATAGGCGC AACAGCCATG TTCTTCATGC AGCGCCTGAA CCTCTTGGCC
TCCTACGGCG ATTTCGTCTG GCCGCGGGTG GTGCTGGGAG TCGGGCTGGC CATGATCTTC
GTGCCGCTGA CAACCGTGAC CCTGGCCACC ATTTCCCGCC AGGAGATGGG CAACGCCACC
GGAATGTTCA ATCTGCTGCG CAACATCGGC GGCAGCGTGG GTATCGCCAT GGCCGCCACC
ATTCTGGCGC GGCGGGAACA GTTCTACCAG ACCGCTCTCT CCGGCCACAG CGTCCCCTAC
GATCCGGTCT GGCAGATGAA GTTCAGCCAG CTCAAACAGG CCCTGGTACT GAAGGGGATA
TCCGTCGCCC AGGCCGACCA GACCGCCCTG GGCATCATGT ACGGGGTGGT GCGCCGCCAG
GCCGGGGCCT TGGCCTTCAA CTACGTCTTC TGGGTGATCG GCGTCGCCTT CCTCTCCATC
ATCCCGCTGC TTCTGCTGCT AAAAAGAAGC AGCCACGAAG GCGAGAACCC GGCGGCTCAC
TGA
|
|---|
| Protein sequence | MTTTSEKNVN KWLITITVML PTIMEIIDTS VANVALPHMQ GSLNAGTDEI TWVLTSYLVS
NAVVLPITGW LSRVFGRKRF LMTCITLFTL ASLLCGSAPT LATLILFRII QGAAGGALIP
ISQAILMETF PPRERGMAMA IFGVGAMFGP IVGPALGGWI TDNLNWRWIF YINLPIGMIA
LVMCGLFIFD PAYLKRGAQT MRIDYGGLVL LTTGMGALQV VLDKGQQEDW FNSSFIIAFS
IIMVVSLVAL VWVELTHDHP IINLRLFRNI SFSAGNFIMF VVGFCLYSSI TMIPLFLQNL
MGYSATDAGM VLAPGGVATL ITMPLVGLML QKRDGRKIVF LGLVIGATAM FFMQRLNLLA
SYGDFVWPRV VLGVGLAMIF VPLTTVTLAT ISRQEMGNAT GMFNLLRNIG GSVGIAMAAT
ILARREQFYQ TALSGHSVPY DPVWQMKFSQ LKQALVLKGI SVAQADQTAL GIMYGVVRRQ
AGALAFNYVF WVIGVAFLSI IPLLLLLKRS SHEGENPAAH
|
|---|
| |