| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2560 |
|---|
| Symbol | |
|---|
| ID | 4572388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 2773871 |
|---|
| End bp | 2775592 |
|---|
| Gene Length | 1722 bp |
|---|
| Protein Length | 573 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639756609 |
|---|
| Product | thiamine pyrophosphate binding domain-containing protein |
|---|
| Protein accession | YP_902222 |
|---|
| Protein GI | 118580972 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000271615 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTGA CGGTAAGCGA TCTGATCGTG GAGTATCTGG AGCAGTTTGG CGTGGAGTAC
GTATTCGGCG TCCCGGGCAG CCCGTTGGGG CCGCTGTTCG ACGCCCTGGT GTGCAGCGAG
AAACGGGGCG GCCCGCGGCT TGTGCTGGCC CGCCACGAGG CGGGAGCGGC GTTCATGGCC
GACGGCTATG CCCGGGAGAG CGGAAGGATC GGCGTCTGCT GCTCCACCAC CGGGCCGGGC
GCCACCAACC TGATCACCGG CGTGGCCGGC GCTTATGCCG AGCAGGTGCC CATGCTGGTG
CTCTCCTCCC AGACCAGGGT GACCGATTTC AGCTTCGGCT GTTTCCAGGA CTCTTCCCGG
GACGGCGTGG ACATCATGAG CATGTTCGCC TGCTGCACCC GCTACAACTC CCTGGTGTCA
CACCCCAACC AGTTGGAGAA GAAGCTGGCC TCGGCCCTGA CCACGGCGTT GGGCAGCCCC
CGGGGACCGG CCCACCTGAG CATCCCCATC GACATCTTCG GCGCCGATGC CAGTGGTCCA
GCCTCTTATC CCGGACTGCA CTCCCTGGTG AGCGCCGAGG AAAGCACCGT CGACGGCGCG
GCTCTGGAGC GGTTGATGAA TGAGATCACC ACCGTACGGA GCACTTCCGG CCGGATCGTC
CTGCTGGCAG GGGCCAACGC CATCAGCGCA GGCGACCTGA TCACACGCTT CGCCGAACTG
ACCGGGGCCA AGATCATCAC CACCCCGCGG GGAAAACCGG CCATCAACCC CTATCATCCC
TTGGCGCGCG GCGTGTTCGG TGTTTCCGGG CACAGTTCGG CCCGCCAGAC ACTGGCGGAG
GATAACGTCC AGCTGATCTT GGCCGTGGGG AGCAACCTGG GGGAATGGGA GACCAGCAAA
TGGGACCCAA TCCTGATGAA CGATTGCATG GTGCACATCG ACAGCGACCG CCAGAACTTC
ACCCGCTCCC CCATGGCCAG ACTGCACCTC TACGGGGGGA TTCATGCCAT CTTCGAACAG
TTGAACCGCC GACTGGAGCA ACATGACGGC TCGGCCGTCT CCCGTTCCAA AGGGTCCGCT
GAAACCGCTC CCGCGACGAG CGCCTATGTG CCGGCGGGAA TCAGCGTGCG CAACGCCGAC
TGCTGCGCTC CTCCTGCCAG CGGCCAGCTG CTCAAGGCGC CCCAGGTGTA CGTGGAGCTA
ATCCAGCGCC TGCCGCGGGA GAGCCGTTTC TTCATCGACA ACAGCAACAG CGTGCCCTGG
TCCATCCACT ACTTCTTCCA CCAGCGACCG GAGGCGCTGC ACTACTCCAT CGAATTCGCC
ACCATGGCCT GGGCCGTGGG CGCCGCGGTG GGAGGAGCAT TCGCCAATCA AAAGGCGCCG
TCAGTCTGCA TCGCCGGCGA CGGTTGCTAT CTGATGAGCG GCCAGGAGAT AACCGTGGCG
GTGGAGCGGC GCCTGCCGGT GATCTTCGCG GTGCTGAACG ACCAGGCCTA CGGCCTGATC
AGGCACGGCC ACCGGACCCA CGGCAGGGAG GCGGTGGATT TCAGCATTCC GCCGGTGGAT
TTCGCCATGA TGGCCCGCTC CACCGGCGCC CAGGCCTTCA CCATCCGTTC CATCGAGGAC
TTCGAAACCA TCGACTGGCA GAAGCTGGCA ACCCACCAGG GGCCGACGCT CTTGGATGTG
ACCATCGACC CGAAGGAACC GCCGCCACTG GCCATGGCGT AG
|
|---|
| Protein sequence | MALTVSDLIV EYLEQFGVEY VFGVPGSPLG PLFDALVCSE KRGGPRLVLA RHEAGAAFMA
DGYARESGRI GVCCSTTGPG ATNLITGVAG AYAEQVPMLV LSSQTRVTDF SFGCFQDSSR
DGVDIMSMFA CCTRYNSLVS HPNQLEKKLA SALTTALGSP RGPAHLSIPI DIFGADASGP
ASYPGLHSLV SAEESTVDGA ALERLMNEIT TVRSTSGRIV LLAGANAISA GDLITRFAEL
TGAKIITTPR GKPAINPYHP LARGVFGVSG HSSARQTLAE DNVQLILAVG SNLGEWETSK
WDPILMNDCM VHIDSDRQNF TRSPMARLHL YGGIHAIFEQ LNRRLEQHDG SAVSRSKGSA
ETAPATSAYV PAGISVRNAD CCAPPASGQL LKAPQVYVEL IQRLPRESRF FIDNSNSVPW
SIHYFFHQRP EALHYSIEFA TMAWAVGAAV GGAFANQKAP SVCIAGDGCY LMSGQEITVA
VERRLPVIFA VLNDQAYGLI RHGHRTHGRE AVDFSIPPVD FAMMARSTGA QAFTIRSIED
FETIDWQKLA THQGPTLLDV TIDPKEPPPL AMA
|
|---|
| |