| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2514 |
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| Symbol | |
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| ID | 4572117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | - |
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| Start bp | 2723222 |
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| End bp | 2724928 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639756563 |
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| Product | type IV-A pilus assembly ATPase PilB |
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| Protein accession | YP_902176 |
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| Protein GI | 118580926 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E
[TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.066963 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTTGA GCAGGCTGGG AGAAATCCTG GTAACCAACA ACCTGATCAC CAGAGAACAG
CTTGCCAAGG CTCTCGAAGA ACAGAAGATG TCCGGCGGGC AGGCCCGTCT CGGCACGATC
CTGGTCAAGC AGAACCTGAT CAGCGAAGAG AATCTGACGG CATTTCTCTC CAAACAGTAC
GGTGTGCCCA CGGTCAGCCT TTCCAACTAT GACGTGGATC CGGCTGTTAC CAAGATCATC
CAGTCCGAGG TTGTCCAGAA GTATCAACTG GTTCCCATCA ACCGCGTCGG GGCGACCCTG
GTCGTGGCGG TTACCGATCC CTCCAATCTC TTCGCCATCG AAGACATCAA GTTCATGACC
GGCTACAACG TGGAGATGGT CATCGCTTCG GAAAGCGATA TCAAGGCGGC CATCGACAAG
TACTACGACC AGTCCGCCTC CCTGGCCGAT GTCATGGATG ACATGAACCT GGAGGACCTG
GAGGTGGTTG ATGTCGACGA GGATGTGGAC ATCAGCTCCA TGGAGCGGGC CACGGAGGAT
GCGCCGGTGG TCAGGATGGT CAATGCCATT CTGCAGGATG CCATCAAGAA GAAAGCCAGC
GACATCCACA TCGAGCCCTA CGAGAAGCTG TTCCGGGTGC GCTACCGCAT CGACGGCGTG
CTGTACGAGG CCATGAAGCC GCCGCTGAAG CTGAAGAACG CCATTACCTC GCGCATCAAG
ATCATGGCTG AGCTGGATAT CGCCGAGCGC CGCCTCCCCC AGGACGGCCG CATCAAGATC
AAGCTGGGCG GCGGAAAGGA TATGGACTTC AGGGTCTCGG TCCTGCCGAC TCTGTTCGGC
GAGAAGATCT GCATGCGTCT ATCGGACAAG AGCAGCCTGC AGACCGATCT GACCAAGCTG
GGCTACGAGC CGGAGGCCCT GGAGAACTTC CTGCGGGAGA TTCACAAGCC CTTCGGCATG
GTGCTGGTCA CCGGTCCCAC CGGCAGTGGC AAGACCGTTT CGCTCTATTC GGCCATTGCC
GAGCTGAACA AGGTCTCCGA GAATATATCA ACCGCCGAGG ATCCGGTGGA GTTCAACTTT
GCCGGCATCA ACCAGGTCCA GATGCACGAG GACATCGGCC TCAACTTCGC CGCCGCGTTG
CGCTCCTTCC TGCGTCAGGA TCCGGATATC ATCATGATTG GCGAGATCCG CGACTTCGAA
ACCGCTGAGA TCGCCGTCAA GGCCGCCCTG ACCGGCCACC TGGTGCTCTC CACCCTGCAT
ACCAACGATG CCCCCGCCAC CATCAACCGC CTGCTGAACA TGGGCATCGA GCCGTTTCTG
GTGGCATCGG CGGTGAACCT GATCACCGCC CAGCGCCTGG CACGGCGCGT CTGCAAGGAG
TGCAAGGAGC CGGAGGATAT TCCGGTCCAG GCGCTGATCG ATGCCGGCGT GCCGCCCGAC
GAAGCCCCTG GCTATGTCTG CTACCGTGGC AAGGGGTGCC CGGTCTGTAA CGGCACCGGC
TACAAAGGGA GGGTTGGCTT CTATCAGGTC ATGCCGATGC TGGACGAGAT CCGCGAACTG
ATCCTCAACG GGGCCAATAC CGCCGAGATC AAGCGCGAAA CCATGCGGCT GGGGATCAAG
TCCATGCGCC AGTCCGGGCT CACCAAGCTC AAGGAAGGGG TTACCTCGTT CGAAGAGGTG
CTGCGGGTCA CCATCGCCGA TACCTAA
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| Protein sequence | MQLSRLGEIL VTNNLITREQ LAKALEEQKM SGGQARLGTI LVKQNLISEE NLTAFLSKQY
GVPTVSLSNY DVDPAVTKII QSEVVQKYQL VPINRVGATL VVAVTDPSNL FAIEDIKFMT
GYNVEMVIAS ESDIKAAIDK YYDQSASLAD VMDDMNLEDL EVVDVDEDVD ISSMERATED
APVVRMVNAI LQDAIKKKAS DIHIEPYEKL FRVRYRIDGV LYEAMKPPLK LKNAITSRIK
IMAELDIAER RLPQDGRIKI KLGGGKDMDF RVSVLPTLFG EKICMRLSDK SSLQTDLTKL
GYEPEALENF LREIHKPFGM VLVTGPTGSG KTVSLYSAIA ELNKVSENIS TAEDPVEFNF
AGINQVQMHE DIGLNFAAAL RSFLRQDPDI IMIGEIRDFE TAEIAVKAAL TGHLVLSTLH
TNDAPATINR LLNMGIEPFL VASAVNLITA QRLARRVCKE CKEPEDIPVQ ALIDAGVPPD
EAPGYVCYRG KGCPVCNGTG YKGRVGFYQV MPMLDEIREL ILNGANTAEI KRETMRLGIK
SMRQSGLTKL KEGVTSFEEV LRVTIADT
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