Gene Ppro_2338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_2338 
Symbol 
ID4574498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand- 
Start bp2527398 
End bp2528072 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content47% 
IMG OID639756388 
ProductCRISPR-associated Cse3 family protein 
Protein accessionYP_902003 
Protein GI118580753 
COG category 
COG ID 
TIGRFAM ID[TIGR01907] CRISPR system CASCADE complex protein CasE/Cse3 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTCCTGA GTAGACTGCG CTTGAATTTG CGATGCCGGG AGGCTCGGCG GGATCTTTCC 
AACCCGTATC AGCTACATTC AACGCTCTGT CGTGCATTCA GTCCGCCAGA GACGAAATGC 
CCCAAAGGCG AGTTTTTATG GCGTCTAGAG CCGGAAACAG ATTCTTCCGG TTATCCGAGA 
ATCATTGTGC AGAGCAGGAA TATTCCGGAT TGGGGTGGTG TTGGAGTCAA TGGCTGGATA 
CAACAGGCCG ATCCGGCAAT TGATTTGAAG GAACGGCTCA AACTCGATTT ATTAAAGGCT 
GAACAGCGTT TTCGCTTCAG GCTGCGTGCT AATCCCTGCG TAACCAAAAA CGGTAAGCGT 
CTTGGGTTGT TGAAACAGGA TGAGCAGGAA AAATGGCTTA AACGAAAAGG GGCTCAGCAT 
GGTTTTTGCT TGCCGGAATT TCTTTCATTC GACTATTACG AATCATCAGA AGATCGGATA 
GACGTAAGGA TTTCACAGGA GCAAATGCTG AGTGACAAGC AACATTCAGA TAATTCAATT 
CGGGTTTTTT CGGTGCTCTA CGATGGAATC CTTACTATTA CCGAACCGGA GATGTTCAAG 
ATTGCCCTGA AAACTGGCAT TGGCCACGGC AAGGTTATGG GTCTTGGGCT TTTGTCAGTG 
GTCCCAATTT TTTGA
 
Protein sequence
MFLSRLRLNL RCREARRDLS NPYQLHSTLC RAFSPPETKC PKGEFLWRLE PETDSSGYPR 
IIVQSRNIPD WGGVGVNGWI QQADPAIDLK ERLKLDLLKA EQRFRFRLRA NPCVTKNGKR 
LGLLKQDEQE KWLKRKGAQH GFCLPEFLSF DYYESSEDRI DVRISQEQML SDKQHSDNSI 
RVFSVLYDGI LTITEPEMFK IALKTGIGHG KVMGLGLLSV VPIF