| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2264 |
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| Symbol | |
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| ID | 4574988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | - |
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| Start bp | 2443736 |
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| End bp | 2444281 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639756312 |
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| Product | CMP/dCMP deaminase, zinc-binding |
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| Protein accession | YP_901929 |
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| Protein GI | 118580679 |
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| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0590] Cytosine/adenosine deaminases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000142338 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCGGTCA TGATCGTGGA AAAGAAGAGT ATCGCCCGCA GCCACGAGTA CTGGATGCAG
CGGGCCATAG CCGAGGCGGG CAAGGCCCGC AGCAGGGACG AGGTCCCCAT CGGCTGCGTG
ATCGTCAGGG ACAACAGGAT TATCGCCCGC GGCCACAACC TGCGGGAGAG TTCCCAGGAC
CCTTCCGCCC ATGCCGAGAT GATCGCCATA CGCAAGGCAG CCCGAAAGCT CTCCTCCTGG
CGACTCCTGG ACACCACCCT CTATGTAACC CTGGAACCCT GCACCATGTG CATGGGCGCC
ATCATCCTTT CGCGCATCCC CCGCGTCGTG TTCGGCTGCC TGGACCCCAA GGGGGGGGCG
GCCGGTTCGC TCTACGATCT CTCCAACGAT CCCCGTCTCA ATCATCGTGT GGAACTGCTG
CCCGGCGTGC TGGAGCGCGA TTGCTCGTCG CTTTTGAGCG GCTTCTTCGC CGAGTTGAGG
AGGCGCAGGC GTGAGGCGCG CCTTAGCTCC GCTGGAGAGC TTCCCGGAAC TCCACAGGGC
TGTTGA
|
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| Protein sequence | MPVMIVEKKS IARSHEYWMQ RAIAEAGKAR SRDEVPIGCV IVRDNRIIAR GHNLRESSQD
PSAHAEMIAI RKAARKLSSW RLLDTTLYVT LEPCTMCMGA IILSRIPRVV FGCLDPKGGA
AGSLYDLSND PRLNHRVELL PGVLERDCSS LLSGFFAELR RRRREARLSS AGELPGTPQG
C
|
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