Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_2228 |
Symbol | |
ID | 4575022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 2403443 |
End bp | 2404111 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639756276 |
Product | two component transcriptional regulator |
Protein accession | YP_901893 |
Protein GI | 118580643 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00319429 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGGAA GCGTACTGAT TGTTGAGGAT GAGGAGAAGC TGTCGTCGCT TCTGCACGAT TACCTGTCGC AGTCCGGCTT CGAGACGCAC CGCTTGAGAA ACGGCCTGGA CGTGGTTCCC TGGGTGCGCG AACGGAACCC GGACCTGATC CTGCTCGACC TGATGCTGCC GGGGCGGGAC GGCCTGGAGA TATGCAAGGA GATCCGCTCC TTTTCATCGG TGCCGATCAT CATGACCACG GCCCGGGTGG AGGAGATCGA CCGACTGCTC GGCCTGGAAC TGGGGGCCGA CGATTACATC TGCAAACCGT TCAGTCCCCG TGAGGTGGTT GCGCGGGTCA AGGCGGTCCT GCGCAGAACC GATGGGGGAA CGACCATCAA GGCCTCCGGA CTGACTTTGG ATGAATTGCG CCTGCGGGCC GTCCTGAACG ACCGGGACCT GGAACTGACC GCGGTGGAGT TCAAGCTGCT GCAGTTTTTG GCCGCCAACC CCGGGCGCAT CTACAGTCGC CAGCAGTTGA TGGATCGCAT CTATCCTGAC GAGCGCATCG TTTCCGACCG GACCATCGAC AGCCACATCA AAAAGCTGCG CCGCAAAATC GCCGTTGCCA CCCCCGATGA GGAGCTGATC CATTCCGTGT ACGGTGTGGG TTACAAGTTT GAACGCTGA
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Protein sequence | MNGSVLIVED EEKLSSLLHD YLSQSGFETH RLRNGLDVVP WVRERNPDLI LLDLMLPGRD GLEICKEIRS FSSVPIIMTT ARVEEIDRLL GLELGADDYI CKPFSPREVV ARVKAVLRRT DGGTTIKASG LTLDELRLRA VLNDRDLELT AVEFKLLQFL AANPGRIYSR QQLMDRIYPD ERIVSDRTID SHIKKLRRKI AVATPDEELI HSVYGVGYKF ER
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