Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_2219 |
Symbol | |
ID | 4575013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | - |
Start bp | 2395327 |
End bp | 2397285 |
Gene Length | 1959 bp |
Protein Length | 652 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639756267 |
Product | ABC transporter related |
Protein accession | YP_901884 |
Protein GI | 118580634 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAACGGC CATTACTAGA ACTCCAGGGG GTGGGGCGGC GCTTTGTCAC CGGAGGAGAG GAGATCCCGG TGCTGAAGGG GATCGACCTG AGCATCCGCA GCGGCGAGAT GGTGGCCATC GTGGGCGCCT CCGGGTCGGG AAAATCCACC CTGATGAACA TCCTCGGCTG TCTGGATCGG CCAAGCGAGG GAATGTACCG CATAAACGGC ATGGAGGTGG GCCGGCTCTC GGGAAACGAA CTGGCCAGGC TGCGGCGGGA GTACTTCGGC TTCATCTTCC AGCGCTACCA CCTGATGCCG CACCTGAGCG CCACCCAGAA CGCCGAAATA CCGGCGGTCT ATGCCGGAAT GCGCAAGGGG GAGCGGCGGG CGCGGGCCAT CGAGCTGCTC CGCCGCCTTG GCCTGGGGGA TCGCTGCGAC CACCGCCCCA ACCAGCTCTC CGGCGGCCAG CAGCAGCGGG TGAGTATTGC CCGGGCGCTG ATGAACGGCG GCGACCTGAT ACTGGCCGAT GAACCGACCG GTGCCTTGGA CAGCAGGAGC GGCCAGGAGA TGATGACCAT TCTCCATGAG CTGCACGACC GGGGGCACAC CATCATCCTG GTCACCCATG ACATGCAGGT GGCCAGCCAC GCCCAGCGGA TCATCGAGAT CAGCGATGGC GAGATTGTCC GGGACCAGTG CAACCCAGCC GTGAAAACGG CTGCAAAGGA GAAATTGCCC CAGAGGAGAC TGCCGGAGAA AGACGCCACC TTTTTACAGG CCAACTGGGG GCGCTTCGCC GAGGCTTTCA AGATGGCCCT GATCGCCATG GCATCCCACC GCATGCGGAC GCTTCTGACC ATGCTGGGGA TCATCATCGG CATCACCTCG GTGGTCTCCG TCGTGGCGCT GGGTCAGGGC GCCCGCCAGA AGGTGATCAA TGATATCAGC GCCATGGGGA CCAATGTCAT CGATATCAAT CCGGGTAAGG ATTGGGGGGA TGAGGATGCC GCCGATATCC AGACACTGGT GCCTGCCGAT CTGGAGGCGC TGAAGGCACA GGTCTACGTG GACAGCACGA CCCCCTCCAC CGGCGGCACC CAGCTCCTGC GCTACCACAA CATCACGGCC AATGCCACGG TCAGCGGCGT GGGGGAACAG TATTTCCGTG TCAAGGGATA CAAGACCGCA CAGGGCGCCC CCTTTGGTTC CGATGATATC AAGCGCCAGG CCCAGGTGGT GGTTATCGAC CAGAACACCA GAAAGAAATT CTTCAAAGAC ATTGATCCGG TTGGCAAGGT GCTCTTTGTC GGCTCGCTCC CCTGCCGGGT CATGGCCGTG ACCAAGGAAA AGGATGGTCC CTTCGGCAGC AGCCAGAACC TGGAGGTGTG GATTCCCTAC AGCGCCGCCA TGAGCCGGCT TCTGGGAGAG CAGTATTTCA GTTCCATCAC GGTCAGGGTC CGGGACGGTT TTTCCAACCA GATCGCCGAG CAGAGCATCA TCAAGCTCCT GACGCAGCGC CACGGCCGCA AGGACTTCTT CACCAACAGC AGCGACACCA TCATGAAAAC CGTGAACAAG ACCACCTCCA CCATGGCCCT GATGATCTCG GCCATTGCCG TTGTCTCGCT GGTGGTGGGG GGGATCGGGG TCATGAACAT CATGCTGGTC TCGGTCACCG AAAGGACCCA TGAGATCGGC ATCCGCCTGG CCGTGGGCGC CCGGCAGGAC GACATCCTGC AGCAGTTCCT GATCGAATCG GTGCTGGTCT GCCTGATCGG CGGCCTGATC GGCATCCTGC TCTCCTACGG GGTGGGGCTG CTCTTTCCGT TGTTCGTCTC CAGCTTTGCC ATGCAGTTTT CCCTGGCCTC GATCGTATCG GCGTTTCTCT GCTCAAGCAT CATCGGTATC CTGTTCGGCT TCTTGCCGGC ACGCAACGCG GCGCGTCTCG ACCCGATCGA AGCGTTGGCC AGGGAGTAG
|
Protein sequence | MERPLLELQG VGRRFVTGGE EIPVLKGIDL SIRSGEMVAI VGASGSGKST LMNILGCLDR PSEGMYRING MEVGRLSGNE LARLRREYFG FIFQRYHLMP HLSATQNAEI PAVYAGMRKG ERRARAIELL RRLGLGDRCD HRPNQLSGGQ QQRVSIARAL MNGGDLILAD EPTGALDSRS GQEMMTILHE LHDRGHTIIL VTHDMQVASH AQRIIEISDG EIVRDQCNPA VKTAAKEKLP QRRLPEKDAT FLQANWGRFA EAFKMALIAM ASHRMRTLLT MLGIIIGITS VVSVVALGQG ARQKVINDIS AMGTNVIDIN PGKDWGDEDA ADIQTLVPAD LEALKAQVYV DSTTPSTGGT QLLRYHNITA NATVSGVGEQ YFRVKGYKTA QGAPFGSDDI KRQAQVVVID QNTRKKFFKD IDPVGKVLFV GSLPCRVMAV TKEKDGPFGS SQNLEVWIPY SAAMSRLLGE QYFSSITVRV RDGFSNQIAE QSIIKLLTQR HGRKDFFTNS SDTIMKTVNK TTSTMALMIS AIAVVSLVVG GIGVMNIMLV SVTERTHEIG IRLAVGARQD DILQQFLIES VLVCLIGGLI GILLSYGVGL LFPLFVSSFA MQFSLASIVS AFLCSSIIGI LFGFLPARNA ARLDPIEALA RE
|
| |