| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2205 |
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| Symbol | |
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| ID | 4575068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | + |
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| Start bp | 2380467 |
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| End bp | 2381882 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639756253 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_901870 |
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| Protein GI | 118580620 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.916558 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCGA TACTGCCCGT TGCCATGGCT ACGCTGCTCT TGGCCTGCAG CGTGGGACCT
GACTATGTCA GGCCGACCGC GGTCGTGCCG GCCGCATTCG GGGAGAGCGC CCCCTGGAGG
GTTGCCCAGC CCCGCGACAA CGCCCAGCGT GGTCCCTGGT GGCATATCTA CGAAGACCCT
CGCCTGAACG GGCTGATGGA ACAGGTTACG CTTTCCAACC AGTCGCTCAA GGCCGCCGAG
GCGCAGTTCC GCCAGGCGAG AGCCCTTGTC CAGGCCGCCC GCTCCGGTTA TCATCCCCAG
CTGCACGGGG GAGCGTCGCT GGATCGTTCC CGGAGCTATT CCAAAAACAG TGGGTCAACC
TCCACGACCT ACCTGCTCTC AGCCGATGCC TCCTGGGAAC TGGACCTGTG GGGACGGGTG
CGCCGCGACG TCGAGGCCAG CCGGGCCGAG GCCCAGGCCA GCGCGGCCGA CCTGGAATCG
CTGCGTTTGA GTATCCAGGC GGAACTGGTG GGAGACTACT TCCAGCTGCG AACCATCGAC
GCCCAGAAAC GGCTCCTGGA CGAGACCGTC TCCTCCTACG AGCAGTACCT GGAGCTGACC
AGAAACCGCC ATGCGGCCGG CGTGGCCTCC CCGGCCGACG TGCTCCAGGC CGAGACCCAG
CTGAGGAACA GCCAGGCCCA GGCAATCGAC CTGGGAGTGG AGCGCGCCCA ACGGGAGCAC
GCCATTGCGC TTCTGATCGG CAGGGCCCCG GCCGAGTTCA CCCTGACGCC CATTCCCCTG
GACAGCATCC CTCCCCCTTC ACCTCCCGGC CTGCCGTCCC GGCTCCTGGA ACGCAGGCCG
GACATAGCGG CGGCCGAGCG GCGGGTTGCT GCGGCCAATG CCCGCATCGG CGTCGCCACG
GCAGCCTACT TCCCCGCCAT TACCTTGAGC TCTTCCGCCG GCTTCGCCTC ATCGAGCCTT
TCCAACTGGC TGAGTTGGCC CGGCCATGTC TGGGCCCTGG GGAGCGCCAT CGCCCAGACC
GTCTATGACG GCGGCCTGCG AGGGGCGCAG GTGGACGAGG CCCGGGCAAC CCATGAAGCC
ACGGTGGCCA ACTACCGCCA GACGGTCCTG ACCGCCTTCC AAGAGGTAGA AGACAACCTG
GCCGCGCTGC GTATCCTGGA GCAGGAGGCG GCAGTGCAGG ATCAGGCGCT GCGGGCGGCA
CGCCAGTCGC TGGTAATCAC CACCAACCAG TACCGTGCCG GGATCGTCGG CTATCTCAAC
GTCATCGTCG CCCAGACAAC CGCCCTTGAA CTGGAGCGGG ACAGCATCGA CCTCATGGGA
CGGCGCATGG CGGCCAGCGT GAATCTGGTC AAGGGGATCG GGGGTGGCTG GGATGCCGCT
GACCTGGCGG CGATTGACGG GAACGGACAG CAATAG
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| Protein sequence | MKPILPVAMA TLLLACSVGP DYVRPTAVVP AAFGESAPWR VAQPRDNAQR GPWWHIYEDP
RLNGLMEQVT LSNQSLKAAE AQFRQARALV QAARSGYHPQ LHGGASLDRS RSYSKNSGST
STTYLLSADA SWELDLWGRV RRDVEASRAE AQASAADLES LRLSIQAELV GDYFQLRTID
AQKRLLDETV SSYEQYLELT RNRHAAGVAS PADVLQAETQ LRNSQAQAID LGVERAQREH
AIALLIGRAP AEFTLTPIPL DSIPPPSPPG LPSRLLERRP DIAAAERRVA AANARIGVAT
AAYFPAITLS SSAGFASSSL SNWLSWPGHV WALGSAIAQT VYDGGLRGAQ VDEARATHEA
TVANYRQTVL TAFQEVEDNL AALRILEQEA AVQDQALRAA RQSLVITTNQ YRAGIVGYLN
VIVAQTTALE LERDSIDLMG RRMAASVNLV KGIGGGWDAA DLAAIDGNGQ Q
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