Gene Ppro_2105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_2105 
Symbol 
ID4574721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand- 
Start bp2264445 
End bp2265536 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content48% 
IMG OID639756151 
Productpolysaccharide biosynthesis protein 
Protein accessionYP_901771 
Protein GI118580521 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3754] Lipopolysaccharide biosynthesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCAACAA AAGCGAGGCT GATAGCTTTT TACCTACCCC AATTTCATCC GATCCCAGAA 
AATAATGCAT GGTGGGGAAC CGGTTTCACC GAATGGACAA ATGTCAGCAA AGCGCGCCCG 
TTGTTCAAGG GACATTACCA ACCGCATTTG CCGGCTGATC TGGGCTTTTA TGATCTGCGT 
CTCCCGGAGG CCAGAATAGC CCAAGCTGAA CTGGCCCGAG AATATGGCAT TCACGGTTTC 
TGTTACTACC ACTACTGGTT TAATGGTCGG AGGATTCTTG AAAGGCCATT TACCGAGGTG 
CTTGCTTCAG GCAATCCTGA TTTTCCCTTC TGTCTCTGCT GGGCCAACGA AAACTGGACA 
CGGACCTGGG ATGGCGGGGC CGATAACATC CTGCTCCGTC AGCGATACAG CGACGAAGAT 
GATCTCGCAC ATATACATTC TCTCTTGCCC GCTCTGAGAG ATTCCCGCTA CATACGCATC 
AAAGGAAAAG CGCTGATACT CGTTTATCGC ACTGAAATAC TACCCGATCC GAAACGAACC 
GTTGACATCT GGCGCTCCGA GGCATGTAAG GCGGGGGCTG GAGATTTGTA TCTGGTAAGG 
GTTGAAAGTT TTACGAGTGG GATGGAACCC GCTTCAATTG GATTTGACGC CGCCGTTGAG 
TTTGCACCCG ACTGGCATAA TAAAGGGAAT ATCACGCAAC GGGGGCTTTT TAGTAAATTA 
ATGACTTACC TAGGGCTCAA ATCAATGAAT TGCCTGAAAC ACCAAATTTA TGAATATAGT 
TCGCTTGTTG ATGCCATGCT TGGCAAGGAA CTTCCTACCT ACCCATTCTA CCGATGTGTC 
TGCCCTTCAT TTGACAACAG CCCCCGTCGC AAGACTGATT CAGTGGTTTT TCACAATTCA 
ACACCTGAAC TCTATTTCCG GTGGCTTAAT GAGGTTGTTG AATGGACATC CTGCAACCAT 
TCGCCCGAAG AACGATTGGT ATTTGTAAAT GCCTGGAACG AATGGGGAGA GGGAAATCAT 
CTGGAACCTG ATCTTCGTTG GGGTAAACAA TATCTCGAAA AGACCAGACA AGCAATTAAT 
CGGTGTAACT GA
 
Protein sequence
MSTKARLIAF YLPQFHPIPE NNAWWGTGFT EWTNVSKARP LFKGHYQPHL PADLGFYDLR 
LPEARIAQAE LAREYGIHGF CYYHYWFNGR RILERPFTEV LASGNPDFPF CLCWANENWT 
RTWDGGADNI LLRQRYSDED DLAHIHSLLP ALRDSRYIRI KGKALILVYR TEILPDPKRT 
VDIWRSEACK AGAGDLYLVR VESFTSGMEP ASIGFDAAVE FAPDWHNKGN ITQRGLFSKL 
MTYLGLKSMN CLKHQIYEYS SLVDAMLGKE LPTYPFYRCV CPSFDNSPRR KTDSVVFHNS 
TPELYFRWLN EVVEWTSCNH SPEERLVFVN AWNEWGEGNH LEPDLRWGKQ YLEKTRQAIN 
RCN