| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2100 |
|---|
| Symbol | |
|---|
| ID | 4574716 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 2258393 |
|---|
| End bp | 2259478 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639756146 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_901766 |
|---|
| Protein GI | 118580516 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
|---|
| TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGGCGCG CGGTTGCCTG CGTTGCCTCA CGTATGCCGA TTTCAACATC ACAGCCGGGA
TCGATCGTCT CCATCCTCCT CATCCGCCCC GGCGGCATCG GCGATGCCGT GCTGCTGATG
CCCGCCATAA TCGCGCTCAA GCAGAAATTC CCCCAAGCAA GTATCACCGT CCTGGCCGAA
CGGCGCAACG CCGCCACCTT TGCCCTCTGC CCGGAGGTTG ACCGTGTCCT GCACTACGAT
ATGCCCTCGG AACTACTCTC CGCGATTCGC GGACGCTATG ACCTGGTGAT CGACAGTGAA
CAGTGGCATC GCCTCTCGGC GGTGGTGGCC CGTCTCTGCC GGCCGAAGCT GCTGATCGGC
TTCGCTACCA ACGAGCGGCG GCGTCTCTTC AGCCATGGCG TCTCCTACTC CCACGACGAC
TACGAGGTGA CCAGTTTTCT CAGGTTGCTG GAACCGCTGG GGATCACTGG GGGAAAGGTC
GAGGCACCAT TTCTGACCGT ACCGGCAGCG GCAATGGAGG AGGCGGATGC CCTGCTGGCC
CCCCTCGGCG GACAGCCATT CGTGGTCATC TTTCCCGGTG CCAGCATTCC CGAACGGCGC
TGGGGGGCTG AGCGGTACAG TCGGGTGGCA GAAGCGCTGA ACGACGAGGG CTATCCTGTC
GTGGTGGTGG GCGGAAATGG CGACAGGGAG CAGGGTGAGC TGATCGTTGC CGCTGGAAGG
GGGCTGAACC TGGCCGGCCG GACGTCCCTG GCCGAAACCG CCGCGGTTCT CGCCAGGAGC
AGTCTGCTGG TGAGCGGCGA TTCCGGGGTG CTGCATCTGG CCGTGGGGTT GGGGGTGCGG
ACCGTCTCCC TGTTCGGGCC GGGGAGGGCG CTGAAATGGG CGCCACGGGG AGGGGGGCAC
GTGGTACTCA ACCGGAACCT GGCCTGTTCA CCCTGCACCA CCTTCGGCAC CACGCCGCCA
TGCCCCAGCG GTGCGCGCTG CATGCGGGAG ATCACGGTTG AGCAGGTGCT GCACCAGATA
AACGCCTTCC TCACGCCCGC TCGCCATGCT CGCTCAAGAC GCCAAGGCGC AAAGGAAAAC
AAATAA
|
|---|
| Protein sequence | MGRAVACVAS RMPISTSQPG SIVSILLIRP GGIGDAVLLM PAIIALKQKF PQASITVLAE
RRNAATFALC PEVDRVLHYD MPSELLSAIR GRYDLVIDSE QWHRLSAVVA RLCRPKLLIG
FATNERRRLF SHGVSYSHDD YEVTSFLRLL EPLGITGGKV EAPFLTVPAA AMEEADALLA
PLGGQPFVVI FPGASIPERR WGAERYSRVA EALNDEGYPV VVVGGNGDRE QGELIVAAGR
GLNLAGRTSL AETAAVLARS SLLVSGDSGV LHLAVGLGVR TVSLFGPGRA LKWAPRGGGH
VVLNRNLACS PCTTFGTTPP CPSGARCMRE ITVEQVLHQI NAFLTPARHA RSRRQGAKEN
K
|
|---|
| |