Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_2090 |
Symbol | |
ID | 4573331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 2249863 |
End bp | 2250282 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639756136 |
Product | nickel responsive regulator |
Protein accession | YP_901756 |
Protein GI | 118580506 |
COG category | [K] Transcription |
COG ID | [COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain |
TIGRFAM ID | [TIGR02793] nickel-responsive transcriptional regulator NikR |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000414666 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGAGA CCATTCGCTT CGGAATTTCC ATTGACGATA AACTACTGGA AAGCTTTGAC CAACTGATTG AGCACAAGGG GTATGCCAAC CGCTCAGAGG CGCTGCGGGA TCTTATCCGA GCCTCGCTGA TCGATGTGAA GTGGGAAAAC GGGGAGGAGG AGATGGTCGG CACCGTGACC CTGGTGTTCA ACCACCACGT GCGCGACCTG TCCGACAAGC TGACCGAGCA CCAGCACGCC TATCACCACC AGATCATCTC GGCGCTGCAT GTGCATCTGG ATGCCCACAA CTGCCTGGAA GTGTTGGTGG TGCGGGGAAA GGCGCGGGAG ATCAAGAAGA TCGCCGACGA GCTGATCGGC GTCAAGGGGG TCAAGCATGG CAAGCTGGTC ATGACCGCCA CCGGCCATGA CCTGCACTGA
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Protein sequence | MGETIRFGIS IDDKLLESFD QLIEHKGYAN RSEALRDLIR ASLIDVKWEN GEEEMVGTVT LVFNHHVRDL SDKLTEHQHA YHHQIISALH VHLDAHNCLE VLVVRGKARE IKKIADELIG VKGVKHGKLV MTATGHDLH
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