| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2052 |
|---|
| Symbol | |
|---|
| ID | 4573895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 2201157 |
|---|
| End bp | 2202029 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639756098 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_901718 |
|---|
| Protein GI | 118580468 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2510] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00300116 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAACTC TCGCCTTCAG CCTGATCGTC GCCTCGGCGG TGATGCACGC CCTCTGGAAC
CTGCTGGTGA AGCGTTGCCG CCACAAGACC GTCTTCATCT GGTGGATGTT CGTGGCCTCC
GGTACGCTCT TCACCCTGAC CCTCCCCTTC GTACCGGAGC AATTCACCTG GCCAAGCCGG
CACACCCTGC TGATGGCATC CATAGGAGCG GTCTGTTTCG TGCTCTACCA CCTGCTGAAC
GGCCGCGCCT ACCGGGACGG CGACCTGTCG GTGGTCTACC CCCTCTCCCA GACCTCCATC
ATCTACGTGC CGATCTGGGG TATGACCCTT TTGGGCGAGC GGCTTACCCT GACCGGTTTA
TGTGGTATCC TGCTGGTTAT CCTGGGCACC TACTCGGTGC AATTGCGGCG CTTGTCCCTG
TCGGACATGC TGCGCCCCTT CCGTGATCTG AAGAGCGTCT CGGTCAGGGC CTCGCTAGGG
GCCGGTTTCA TCTACTCCAT CGGCTCCATC GCCGAAAAAA ACGGGGTCAA GTACTGCCCC
CCGCTCCTTT TTACCTATGT TCTGGTCATG ATGATGCTAC TGCTCATGTC GCTCAACCTG
TGCCGCTCCA GGTACCGCCT GCTGATCGGA GAGGAGCTGC GCGAAAACTG GCGGCTGATC
CTCTGCAGCG GACCGGTGGT GATGGCATCA TTTCTCACCT TCCGCTACGG ACTCAACCTG
GCGCCGGTGA GCTACGCGGT TCCAGTGCGA CAGGTCAGTA TCATGGTGGG GGTGTTGATC
GGCATCTTCT TCCTGGGAGA ATCCTGCGCC AAGATCAGGA TCATGGCTGC CGCCCTGATC
CTCTGCGGTG CGATTCTGAT ACGACTGGGA TAG
|
|---|
| Protein sequence | MSTLAFSLIV ASAVMHALWN LLVKRCRHKT VFIWWMFVAS GTLFTLTLPF VPEQFTWPSR
HTLLMASIGA VCFVLYHLLN GRAYRDGDLS VVYPLSQTSI IYVPIWGMTL LGERLTLTGL
CGILLVILGT YSVQLRRLSL SDMLRPFRDL KSVSVRASLG AGFIYSIGSI AEKNGVKYCP
PLLFTYVLVM MMLLLMSLNL CRSRYRLLIG EELRENWRLI LCSGPVVMAS FLTFRYGLNL
APVSYAVPVR QVSIMVGVLI GIFFLGESCA KIRIMAAALI LCGAILIRLG
|
|---|
| |