Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_1976 |
Symbol | |
ID | 4571801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | - |
Start bp | 2120452 |
End bp | 2121837 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639756022 |
Product | sigma-54 dependent trancsriptional regulator |
Protein accession | YP_901642 |
Protein GI | 118580392 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.178847 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCTT CCCGGGCCAA AGGGGGAACG TCGAACCTGC TCTCTCCCAC CGAGGCGATC CTGGAGAGCA TCTCCGACGG TGTCTTTACC GTTGACATGG AGTGGGTGAT CACCTCCTTC AACCGGGCCG CCGAGGAGAT CACCGGTGTG CCGCGCAGGG AGGCCATCGG CCGCCGCTGC GGCGAGGTGT TCCGCTCCAG CATGTGCGGC GCTGACTGCG CGTTGCAGCG CACCCTCAAG AACGGCAAGC CGGTGATCGG CAGGTCGGGC TACATCATCG ACGCCGACGG CAACCGCATC CCGATCAGTA TCTCCACCGC CGTGCTGCGG GATGCCGATG GACGCGTAAT CGGCGGGGCG GAAACCTTCC GCGACCTGTC CGAAGTGGAA ACCCTGCGAC GGGAGCTGGA GGGTAAGTTC AGCGTGGGGG ATCTCTCCAG TCGCAGCCCG CTGATGCAGC GTATCTTCGA GATCCTGCCG GCCATAGCCG CCAGCCCCAG CACGGTCATG CTGCTGGGGG AGACCGGCAC CGGCAAGGAG GTCATGGCGC GCACGATCCA CTCCTTGGGT TCCCACAGCC AAGGGCCGTT CATCGCGGTC AACTGCGGCG CCCTGCCCGA TACCCTGCTG GAGTCGGAGC TGTTCGGCTA CAAGGCCGGC GCGTTCACCG GCGCCACCCG GGACAAACCG GGCCGTTTCG CCCTGGCCAG GGGAGGGACG ATCTTTCTGG ATGAGATCGG CGAAGTGAGC CCGGCCCTGC AGGTGCGCCT GCTGCGGGTG CTCCAGGAGC GGAGTTTCGA GCCGCTGGGG GCGGTCACGT CCGAAACCAG CGACGCGCGG GTAATCGTGG CCACCAACAG GGATCTTGTC GAGCAGGTGC GCAAGGGGCT CTTCCGGGAG GATCTGTACT ATCGGGTGAA CGTGGTGCGC ATGGAACTTC CCCCCCTGCG CCGCAGGAAG GAGGATATCC CCCTGCTGGT GAATCGCTTC ATCGAGCGGT TCAACCACCT GCAGCTGAAA TCGGTTCCGG GGATCTCCGC CGAGGCGTTG TCGTTGCTCA TGGCCCACGA CTGGCCGGGA AACATCCGCG AGCTGGAGAA TGCCATCGAG CGCGCCTTCA TCCTCTGCAA CGAGGGGCAG ATCGGCATCG GCCACCTCTC CGAGGAACTG CGCGCCCACC GGGCAATGGC AGCGGAAGGC GACGTGCGTT CAGCACACGA CATCCTGGAT GCCCAGGCTA TTCTGGCCTC CCTCGAACGT AACAACTTCA ACCGCCTGGC TGCGGCCAGG GAACTGGGTA TTCACAAGAC GACCCTGTTT CGCAGGATGA AGCGGCTCGG CATCCCCCTC CCCGAGGAGG ACGGTCGATC GCGGCATGCC ACCTGA
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Protein sequence | MTASRAKGGT SNLLSPTEAI LESISDGVFT VDMEWVITSF NRAAEEITGV PRREAIGRRC GEVFRSSMCG ADCALQRTLK NGKPVIGRSG YIIDADGNRI PISISTAVLR DADGRVIGGA ETFRDLSEVE TLRRELEGKF SVGDLSSRSP LMQRIFEILP AIAASPSTVM LLGETGTGKE VMARTIHSLG SHSQGPFIAV NCGALPDTLL ESELFGYKAG AFTGATRDKP GRFALARGGT IFLDEIGEVS PALQVRLLRV LQERSFEPLG AVTSETSDAR VIVATNRDLV EQVRKGLFRE DLYYRVNVVR MELPPLRRRK EDIPLLVNRF IERFNHLQLK SVPGISAEAL SLLMAHDWPG NIRELENAIE RAFILCNEGQ IGIGHLSEEL RAHRAMAAEG DVRSAHDILD AQAILASLER NNFNRLAAAR ELGIHKTTLF RRMKRLGIPL PEEDGRSRHA T
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