| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1871 |
|---|
| Symbol | |
|---|
| ID | 4574612 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 2012572 |
|---|
| End bp | 2013363 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639755919 |
|---|
| Product | DNA/RNA non-specific endonuclease |
|---|
| Protein accession | YP_901540 |
|---|
| Protein GI | 118580290 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1864] DNA/RNA endonuclease G, NUC1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000105859 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATACGTC CTTATCTATT GTCAATTACA GCATTATTGC TGAGTGCCGG AATTGCGTTC
GCTGCTGACA CCTCGTGCCC TGAACATTTT ACCGGTGGAA AAGCACCTGA CATCATCAAT
CAGAAAATGA CCGCCAAGAC CCTTGAAATC TGTTATTCGG GTTATGCGCT CAAGCATTCC
GGCATTACCC GCACTCCACT TTACTCAGCA GAACACCTGA CCCGAGAACG CATGCTTCAT
GGCAAGGGGC TTAAGCGCCA AAGCAAGTTC TTCCCGGATA CCAACATCCC CGCTTCTGAA
AGAGCGGAAC TCCATCATTA TGCGCGGTCA GGTTATGACC GTGGCCATGT TGCGCCTTCT
GCAGATATGT TCGATATACA ATCGCAGCAA GAGTGTTTCA GCCTTGCCAA CATGGTTCCG
CAAGTTCCAG AGAACAACCG TGGCCCCTGG GAAGGTATTG AATCTACGAT TCGGAAAATG
GCCAAAGACC GAGGCGACAT CTATGTTGTC ACCGGCCCGA TTTACCAGGG TGAAATTCAG
AAAATAGGCG GCGCCGTCAT GGTGCCGACC AAACTCTTCA AAGCGGTGTA TGACCCGCAT
CGTCAGGAAT CAGGAGCTTA TCTGATAGAC AATACTGCAG ATGCGCAACC TGAGAAAATC
AGTGTCGCGG ACTTGGAGAA GATTACCGGA ATCAGCCTGT TCCCAGCAGT CGGTGACGCT
ACAAAATCTC TACTCATGCG CCTACCTGAA CCGAAGTCAT ATAAGGAACG GAAGCGGAAA
GGTGATCGGT GA
|
|---|
| Protein sequence | MIRPYLLSIT ALLLSAGIAF AADTSCPEHF TGGKAPDIIN QKMTAKTLEI CYSGYALKHS
GITRTPLYSA EHLTRERMLH GKGLKRQSKF FPDTNIPASE RAELHHYARS GYDRGHVAPS
ADMFDIQSQQ ECFSLANMVP QVPENNRGPW EGIESTIRKM AKDRGDIYVV TGPIYQGEIQ
KIGGAVMVPT KLFKAVYDPH RQESGAYLID NTADAQPEKI SVADLEKITG ISLFPAVGDA
TKSLLMRLPE PKSYKERKRK GDR
|
|---|
| |