Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_1841 |
Symbol | |
ID | 4574841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | - |
Start bp | 1981586 |
End bp | 1982491 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639755890 |
Product | integrase catalytic subunit |
Protein accession | YP_901511 |
Protein GI | 118580261 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTCGGTTG CAAAGAGCAA GTTCTACGCT TGGATCGAGC GTTACGGTAA AGCTAACGAA CACAACGCCC CGATTCCTCG TGATTTCTGG CTTGAGGAAT GGGAGCGGGA AGCCATCATT CAGTTTGCAG TGGACAACCC GCTTGAAGGA TACCGGCGAC TAACCTTCAT GATGCTGGAT CGGGACATTG TGGCCGTCAG TCCTTCCAGC ACCTGGCGTG TTCTTTCAAA AGCAGGTCTG CTCCAGAAAT GGAACAAGAA GAAGAGCCTC AAGGGCACCG GCTTCGTACA GCCGCTCAAA CCACATGAGC ACTGGCATGT GGATGTGTCC TACATCAACA TCTGCGGCAC CTTCTATTAT CTGTGCAGCC TTCTGGACGG ATGCAGTCGC TACATCGTCC ACTGGGAGAT CAGGGAACAG ATGACGGAAA AGGACGTGGA AATCATCATG CAGCGAGCCA AGGAGAAATT CCCCAATGCC CGACCACGAG TTATTTCCGA CAACGGGCCA CAGTTCATTG CCAAGGATTT CAAGGAGTTC ATTCGCGTTT CCGGCATGAC CCATGTAAAG ACAGCACCAT TCTACCCGCA GTCGAACGGC AAATTGGAAC GCTTCCATGG AACCATCAAA GACGAATGCA TCCGTCCCGG CGTGCCGCTT TCACTTGACG ATGCCCGCAG GATGACTGAG AAATACATTG AGCACTACAA CAATGTCAAG TTGCACAGCG CTATCGGCTA CATTGCCCCG GCTGACAAAC TGGCTGGCAG AGACCGGGAA ATATTCAAAG AGCGAGACAG GAAACTGGAA GAAGCCAGAG AACTGAGAAA GCAGAAACGA CAGCAAGCCT TTTCTAAAAT CAATCATTCA GGGAAAGCCG ACCTGCCATT AGATCAAGCG GCCTGA
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Protein sequence | MSVAKSKFYA WIERYGKANE HNAPIPRDFW LEEWEREAII QFAVDNPLEG YRRLTFMMLD RDIVAVSPSS TWRVLSKAGL LQKWNKKKSL KGTGFVQPLK PHEHWHVDVS YINICGTFYY LCSLLDGCSR YIVHWEIREQ MTEKDVEIIM QRAKEKFPNA RPRVISDNGP QFIAKDFKEF IRVSGMTHVK TAPFYPQSNG KLERFHGTIK DECIRPGVPL SLDDARRMTE KYIEHYNNVK LHSAIGYIAP ADKLAGRDRE IFKERDRKLE EARELRKQKR QQAFSKINHS GKADLPLDQA A
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