Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_1769 |
Symbol | |
ID | 4571748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | - |
Start bp | 1899790 |
End bp | 1900359 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639755817 |
Product | lytic transglycosylase, catalytic |
Protein accession | YP_901439 |
Protein GI | 118580189 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGGCCC GCCAATTTTT TACTAAAAGT CAAGCAAAAA AAATGTGGCA TCACGCTGAT TTTGTTACTT TTTTACATTC TCAAAGAACC ATGCAAAGAC CTAACCGGAC GACGCTGATG CGGGATATAA AAAAGGACAA GCTGCTGCGC ACCAAATTCA GACTGATCAA CGCGGCCAAT CCGTCCGAAT ACGAACCGCT GATCAGAACC TGCTCGGAAA AATACGGTGT CAATTCATCA CTGATCAAGG CGGTCATTCA CGCCGAATCC GGTTACAATC CCAACGCGGT TTCCAGCAAG GGCGCCAGCG GCCTCATGCA ACTCATGCCC GGCACCGCCC GGTCGCTGAA CGTGGCCAAC AGCCTCGATC CCAAAGACAA CGTGGAGGGC GGAGTCAAGT ATCTCCGCTT TCTGCTGGAC ACCTTCCACG GCGACGTCTC CCTGGCCCTA GCGGCGTACA ATGCCGGACT AGGCAAAGTG GCCAGATACG GCGGCATTCC TCCCTATACC GAGACCCGTA CCTATGTAAA CCGGGTACTT TCCTACATGC AATCCTACCA GGCCAACTGA
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Protein sequence | MVARQFFTKS QAKKMWHHAD FVTFLHSQRT MQRPNRTTLM RDIKKDKLLR TKFRLINAAN PSEYEPLIRT CSEKYGVNSS LIKAVIHAES GYNPNAVSSK GASGLMQLMP GTARSLNVAN SLDPKDNVEG GVKYLRFLLD TFHGDVSLAL AAYNAGLGKV ARYGGIPPYT ETRTYVNRVL SYMQSYQAN
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