| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1663 |
|---|
| Symbol | |
|---|
| ID | 4572614 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 1782340 |
|---|
| End bp | 1783428 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639755706 |
|---|
| Product | PSP1 domain-containing protein |
|---|
| Protein accession | YP_901335 |
|---|
| Protein GI | 118580085 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1774] Uncharacterized homolog of PSP1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCCACGCA TAGTAACCCT TCAGTTCAGC ACAGCCGGAA AGATGTACGA TTTCAATGCC
GGCGACCTCG ATCTGGCCCC GCACGACAGA GTGCTGGTGG AAACGGACCG GGGTGTTGCC
ATGGCAACCG TTGTTACCGC GCCGATAGAA CGGAGCGAGG AGGAAACGCC CCCCGGCCTG
GTCACGGTCA TGCGCATTGC CACCTTGGCG GACATGGAAA CGCTGAAACG AAACGCCAGC
AAGGAGAAGG AGGCCTACGA CTTCTGCAAC AGGCGCATCA TGGAACGCGC CATGGAGATG
AAACTGGTGC GGGTGGAGTA CCTCTTCGAC GGCAGCAAGG CCATCTTCTA CTTCACCGCC
GACGGCCGGG TGGATTTCCG CGTGCTGGTG AAGGACCTGG CCCACACCTT CCACACCCGC
ATCGAGATGC GGCAGATCGG CGTGCGCGAC GAGTCCAAGA TGGTGGGCGG CATCGGCATC
TGCGGCAGGG AACTCTGCTG CTGCTCCTGG CTGCGGGACT TCCAACCGGT TTCGGTCAAG
ATGGCCAAGG AACAGAACCT GGCTCTCAAC CCCAGCAAGA TCTCCGGCCA GTGCGGGCGC
CTGCTCTGCT GTCTGGACTA CGAATACGAC ACCTACTGCA CCCTGCGCAA GACGTTTCCC
AAATGCGGAA AGCGGGTCAA GACCGATTCC GTCAGCGGCA CGGTGGACAA GCTGAACATC
CTGACCGGCA ACATCACCCT CAGGCTGGAT GATGGCAAGC TGATCCAGGT CAACAAGGTC
GAAATCACCG GAGAAGCCCC CCCGCCCGAG GCGCCGCAGC AACGCTCCGA GACGTCCGGC
GTTCGCCCCG CCCAGAAGAG CCGCGAGCGC CAGGGGAGGG AACGGGCACA GCAGAAGCCG
TCCCAGGCCA GTCGGGAGGA GCAGAAGGTG GATGGCCAGA AAGCGGCACA GCCCGCCACT
GCTCCCCAAC AGGGAGACGG CCAACCCAAG CCGGCCCGCA GAAAGCACCG CTCCCGCAGG
CCGGGGCAAC GCAAGCCGGC AGACGCCGGA TCGCCGGCGG AGAAGGCCAC GGACACCCCC
AAGGAGTAG
|
|---|
| Protein sequence | MPRIVTLQFS TAGKMYDFNA GDLDLAPHDR VLVETDRGVA MATVVTAPIE RSEEETPPGL
VTVMRIATLA DMETLKRNAS KEKEAYDFCN RRIMERAMEM KLVRVEYLFD GSKAIFYFTA
DGRVDFRVLV KDLAHTFHTR IEMRQIGVRD ESKMVGGIGI CGRELCCCSW LRDFQPVSVK
MAKEQNLALN PSKISGQCGR LLCCLDYEYD TYCTLRKTFP KCGKRVKTDS VSGTVDKLNI
LTGNITLRLD DGKLIQVNKV EITGEAPPPE APQQRSETSG VRPAQKSRER QGRERAQQKP
SQASREEQKV DGQKAAQPAT APQQGDGQPK PARRKHRSRR PGQRKPADAG SPAEKATDTP
KE
|
|---|
| |