Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_1596 |
Symbol | |
ID | 4571605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | - |
Start bp | 1706056 |
End bp | 1707159 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639755640 |
Product | riboflavin biosynthesis protein RibD |
Protein accession | YP_901269 |
Protein GI | 118580019 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0117] Pyrimidine deaminase [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain [TIGR00326] riboflavin biosynthesis protein RibD [TIGR01508] 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase, archaeal |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000393826 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGACG ACATCAGGCA GATGAAACGG GCCCTGGCCC TGGCACGCAG GGGGATCGGC AAGACCTCCC CCAACCCGGC GGTGGGATGC GTCATCGTCA AGGACGGGGT CATCGTCGGC ACGGGGTGGC ACCGGAAGGC AGGCACCTCC CATGCTGAGA TCCATGCCCT TGAGATGGCA GGAGAGAGCG CCCGGGGAGC CGACGTGTTT GTGACCCTGG AGCCCTGTTG TCACACCGGA AAGACCCCCC CTTGCAGTCA GGCACTGATC CGGGCAGGGG TGAGACGGGT GGTGGCCGGC ATGTCGGATC CCAACCCCCG GGTCAGCGGC GGCGGCCTGG CCGAGCTGGA GACGGCCGGC ATCCAGGTCG TCTGCGGTGT CCTTGAGAAG GAGTGCCGCG ACCTGAACCG CCCCTTCATC AAGCAGGTCA CCACCGGCAT GCCCCATGTC ACCTACAAGT GCGCCATGAC CCTGGACGGC AAGATCGCCA CCGTGAGCGG CGCATCGCGC TGGATCAGCT GCCAGGAGTC CCGCACACTG GTTCACCGCA TGCGGGCGCG CATGGATGCA ATCATGGTAG GAGTGGACAC CATCATCGCC GACGACCCGC AGCTGACGGT TCGCCACGTA AGGGGCAGGA ACCCGCTGCG GGTGGTGGTG GACACGCGCC TGCGTACCCC GGAGAGCGTC AGGGTACTCG GCGACGGCAA TGCGGTCAAC ACCCTCATCG CCACCGCGGA AACCAACCCG CGCGTGCATC TGCGCTACCA GAACCAGGGG GCCACCATCC TGGTGTGCGA TCAGGAGAAC GGCCGCGTTT CCATGAAAGA CCTGATGTTC AAGCTGGGCA AACGGGGGGT GCAGTCCATC CTGCTGGAGG GTGGAGGGCG CCTGGCCGGA AGCATGCTGG AACAGGGGCT GATCGACGAA TTCGTCTTCT TCCTGGCACC CAAAATTCTG GGAAGCGACG GTTTTTCACC GTTCAGCCTG GTGGGAAGGA CAAGCATGGA GCAGGCATCC AGGCTGAACA TTATCAAAGT GAGCCGCAGC GGCATCGATA TCGTCGTGCA TGCGCGGTCG GAGGCGCCAT GTTCACCGGC CTGA
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Protein sequence | MTDDIRQMKR ALALARRGIG KTSPNPAVGC VIVKDGVIVG TGWHRKAGTS HAEIHALEMA GESARGADVF VTLEPCCHTG KTPPCSQALI RAGVRRVVAG MSDPNPRVSG GGLAELETAG IQVVCGVLEK ECRDLNRPFI KQVTTGMPHV TYKCAMTLDG KIATVSGASR WISCQESRTL VHRMRARMDA IMVGVDTIIA DDPQLTVRHV RGRNPLRVVV DTRLRTPESV RVLGDGNAVN TLIATAETNP RVHLRYQNQG ATILVCDQEN GRVSMKDLMF KLGKRGVQSI LLEGGGRLAG SMLEQGLIDE FVFFLAPKIL GSDGFSPFSL VGRTSMEQAS RLNIIKVSRS GIDIVVHARS EAPCSPA
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