Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_1358 |
Symbol | |
ID | 4573574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 1439524 |
End bp | 1441404 |
Gene Length | 1881 bp |
Protein Length | 626 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639755404 |
Product | TonB-dependent receptor, plug |
Protein accession | YP_901035 |
Protein GI | 118579785 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00131062 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTCA TTAAACCGCC ACATATTTTG AATTCCACAC TATTTTCCCT TCTTCTGCTG TTTGGGGTGG CGCTTCCCTG TGCTCGGGCT GAGAAGGCGG AGGATACCAG TGCGCTGTTC AGTGCTTGGC AGGAATCTTC ATCCTCCAGC GCCACCCGCT CCCCCAAGCC GCTCTCCCTG ACAGCCGAAA ATACGACAAT AATCACCCAA AAGGAGATCG AGTCCCTCAA CGCCCATACC CTGGCCGACG TTCTGGCCAC AATACCGGGC ATCCAGACTC AAAATTATGG CGCAGCTGGT GGCCTTACAA GCGCCAGCAT CCAGAGTGCG AGAAATTATC ACGCGTTGGT GATGGTCGAT GGGATCCCTC TAAACAACTT GAGTGAAAAC TTCTCCGATG TGGCCATGGT CCCGGCGCGG ATCATCGAGC GGATCGAGGT TGTCAAGGGG GCGGCTTCCT CGGCCTGGGG ACAGGCGCTG GGCGGGGTGA TCAACGTTAT CACCAAAACG CCGGATCAGA GAAAGATTGG CGGTGTTGCA ACCTCCTCCT ATGGCGAGGG GGCGACGGCC GACAGCAGCA TTGAACTGAG CGGAACAGTT GACCGCCTGG GCTACTATTT CTCCGGCGGG TATCTGGGAT TCAAGAATAT CCCTCAACAT ATCACCACCG ATTCCAATAA CGTCTATGCC AAGCTGACCT ACGATCTTTC GGACCAGGGA CAGGTGTGGG GTACGTTCAG CCACAGTCAT GGCAACCGCA CCAATCTGTA TATTCCCCGC TCCGACTGGG ACCTGAGGGA AGAACAGAAA ACCACCTATA TCTACGCCTC CCTCGGCATG CGGCGCAAAC TGAGCGACAG CCTGGAGCTG GAAATCAGCG GACGCCACGC CTACCGCAAC TTTGATACCG TTGACACCAA CATCAGCGAC GGTTTGCCCT GGTCCTGGTC ATCCCAGCCC CGCCTGTTGA CCAAGGAAAG GGTCTACGGC GCCAGCGCCA AGCTTATCTG GAGAGAGAGT AACAACCTGC TGGTTGTGGG GGGAGATTTC GAGCATGTCA AGCTCTCCGC AAACGGGACT TATGACTATC CGCTCACGCC CGTTTCCCGT TCGGAAGACC GCTGGGGTTT TTTCCTGAAC GATACGTACA CTATTGGCGA CCTGGCAGTG ACCGTCGGCG CCCGTTTCGA CCGCCCCAAG ACCACATCCG ACCAGTTCAG CCCCTCCCTG GGCGTCACCT ACAAACTGAG TGAAACCACC CTGCTGCGCG GCTACACGGC GCGCGGCTAC AGCCTCTGGG CGTTGACATT TGACGACACG CCGGCGGAAA AGGTCTGGAC ATCCCAAATT GGGATCGAAA CTACTGCTGT CCCGTATCTG TGGCAGAAAT TGACTCTCTT CCGCAACCAG ATGTGGAGTT TTACGACTTG GAATGATAGC GCCGGCATAT ACGAGTCGGA CCGTCGTATG GCGTTGGGAG TGGAATATGA GATTCGCACC ACGCCCGTTT TCAATACCTC CATTGGAGCC GGTTACACCT TTACGGATAC GGAGTTGTCA AAAAACCATG ACTACGAGTC AGGAGTTCCC CGTCATACCG TGCAGGTGTC GTTGCGCTAC GATGACAAGA CCTTTCGCGG TGTCCTGACC GGACGCCACA TCTTCTGGAA CACGCAACCA AGTTCCGAAC CGCTCTATAA CGGTGACTAT GGCGGTATGA TCTGGGACCT GCACCTGGGC GCCACGTTGG TGAAGCGTGA GGAGCGGTCG CTGGAAGTGT TCTTCTCCGG TCGCAATCTC TTCGACGGAT CACAAACACC AAGTAATTAT TGCGTCTATC CCGGCCGCTG GTTCGAGGGT GGAGTGAGGG TACGGTTTTG A
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Protein sequence | MNFIKPPHIL NSTLFSLLLL FGVALPCARA EKAEDTSALF SAWQESSSSS ATRSPKPLSL TAENTTIITQ KEIESLNAHT LADVLATIPG IQTQNYGAAG GLTSASIQSA RNYHALVMVD GIPLNNLSEN FSDVAMVPAR IIERIEVVKG AASSAWGQAL GGVINVITKT PDQRKIGGVA TSSYGEGATA DSSIELSGTV DRLGYYFSGG YLGFKNIPQH ITTDSNNVYA KLTYDLSDQG QVWGTFSHSH GNRTNLYIPR SDWDLREEQK TTYIYASLGM RRKLSDSLEL EISGRHAYRN FDTVDTNISD GLPWSWSSQP RLLTKERVYG ASAKLIWRES NNLLVVGGDF EHVKLSANGT YDYPLTPVSR SEDRWGFFLN DTYTIGDLAV TVGARFDRPK TTSDQFSPSL GVTYKLSETT LLRGYTARGY SLWALTFDDT PAEKVWTSQI GIETTAVPYL WQKLTLFRNQ MWSFTTWNDS AGIYESDRRM ALGVEYEIRT TPVFNTSIGA GYTFTDTELS KNHDYESGVP RHTVQVSLRY DDKTFRGVLT GRHIFWNTQP SSEPLYNGDY GGMIWDLHLG ATLVKREERS LEVFFSGRNL FDGSQTPSNY CVYPGRWFEG GVRVRF
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