Gene Ppro_1358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_1358 
Symbol 
ID4573574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp1439524 
End bp1441404 
Gene Length1881 bp 
Protein Length626 aa 
Translation table11 
GC content56% 
IMG OID639755404 
ProductTonB-dependent receptor, plug 
Protein accessionYP_901035 
Protein GI118579785 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4771] Outer membrane receptor for ferrienterochelin and colicins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00131062 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTCA TTAAACCGCC ACATATTTTG AATTCCACAC TATTTTCCCT TCTTCTGCTG 
TTTGGGGTGG CGCTTCCCTG TGCTCGGGCT GAGAAGGCGG AGGATACCAG TGCGCTGTTC
AGTGCTTGGC AGGAATCTTC ATCCTCCAGC GCCACCCGCT CCCCCAAGCC GCTCTCCCTG
ACAGCCGAAA ATACGACAAT AATCACCCAA AAGGAGATCG AGTCCCTCAA CGCCCATACC
CTGGCCGACG TTCTGGCCAC AATACCGGGC ATCCAGACTC AAAATTATGG CGCAGCTGGT
GGCCTTACAA GCGCCAGCAT CCAGAGTGCG AGAAATTATC ACGCGTTGGT GATGGTCGAT
GGGATCCCTC TAAACAACTT GAGTGAAAAC TTCTCCGATG TGGCCATGGT CCCGGCGCGG
ATCATCGAGC GGATCGAGGT TGTCAAGGGG GCGGCTTCCT CGGCCTGGGG ACAGGCGCTG
GGCGGGGTGA TCAACGTTAT CACCAAAACG CCGGATCAGA GAAAGATTGG CGGTGTTGCA
ACCTCCTCCT ATGGCGAGGG GGCGACGGCC GACAGCAGCA TTGAACTGAG CGGAACAGTT
GACCGCCTGG GCTACTATTT CTCCGGCGGG TATCTGGGAT TCAAGAATAT CCCTCAACAT
ATCACCACCG ATTCCAATAA CGTCTATGCC AAGCTGACCT ACGATCTTTC GGACCAGGGA
CAGGTGTGGG GTACGTTCAG CCACAGTCAT GGCAACCGCA CCAATCTGTA TATTCCCCGC
TCCGACTGGG ACCTGAGGGA AGAACAGAAA ACCACCTATA TCTACGCCTC CCTCGGCATG
CGGCGCAAAC TGAGCGACAG CCTGGAGCTG GAAATCAGCG GACGCCACGC CTACCGCAAC
TTTGATACCG TTGACACCAA CATCAGCGAC GGTTTGCCCT GGTCCTGGTC ATCCCAGCCC
CGCCTGTTGA CCAAGGAAAG GGTCTACGGC GCCAGCGCCA AGCTTATCTG GAGAGAGAGT
AACAACCTGC TGGTTGTGGG GGGAGATTTC GAGCATGTCA AGCTCTCCGC AAACGGGACT
TATGACTATC CGCTCACGCC CGTTTCCCGT TCGGAAGACC GCTGGGGTTT TTTCCTGAAC
GATACGTACA CTATTGGCGA CCTGGCAGTG ACCGTCGGCG CCCGTTTCGA CCGCCCCAAG
ACCACATCCG ACCAGTTCAG CCCCTCCCTG GGCGTCACCT ACAAACTGAG TGAAACCACC
CTGCTGCGCG GCTACACGGC GCGCGGCTAC AGCCTCTGGG CGTTGACATT TGACGACACG
CCGGCGGAAA AGGTCTGGAC ATCCCAAATT GGGATCGAAA CTACTGCTGT CCCGTATCTG
TGGCAGAAAT TGACTCTCTT CCGCAACCAG ATGTGGAGTT TTACGACTTG GAATGATAGC
GCCGGCATAT ACGAGTCGGA CCGTCGTATG GCGTTGGGAG TGGAATATGA GATTCGCACC
ACGCCCGTTT TCAATACCTC CATTGGAGCC GGTTACACCT TTACGGATAC GGAGTTGTCA
AAAAACCATG ACTACGAGTC AGGAGTTCCC CGTCATACCG TGCAGGTGTC GTTGCGCTAC
GATGACAAGA CCTTTCGCGG TGTCCTGACC GGACGCCACA TCTTCTGGAA CACGCAACCA
AGTTCCGAAC CGCTCTATAA CGGTGACTAT GGCGGTATGA TCTGGGACCT GCACCTGGGC
GCCACGTTGG TGAAGCGTGA GGAGCGGTCG CTGGAAGTGT TCTTCTCCGG TCGCAATCTC
TTCGACGGAT CACAAACACC AAGTAATTAT TGCGTCTATC CCGGCCGCTG GTTCGAGGGT
GGAGTGAGGG TACGGTTTTG A
 
Protein sequence
MNFIKPPHIL NSTLFSLLLL FGVALPCARA EKAEDTSALF SAWQESSSSS ATRSPKPLSL 
TAENTTIITQ KEIESLNAHT LADVLATIPG IQTQNYGAAG GLTSASIQSA RNYHALVMVD
GIPLNNLSEN FSDVAMVPAR IIERIEVVKG AASSAWGQAL GGVINVITKT PDQRKIGGVA
TSSYGEGATA DSSIELSGTV DRLGYYFSGG YLGFKNIPQH ITTDSNNVYA KLTYDLSDQG
QVWGTFSHSH GNRTNLYIPR SDWDLREEQK TTYIYASLGM RRKLSDSLEL EISGRHAYRN
FDTVDTNISD GLPWSWSSQP RLLTKERVYG ASAKLIWRES NNLLVVGGDF EHVKLSANGT
YDYPLTPVSR SEDRWGFFLN DTYTIGDLAV TVGARFDRPK TTSDQFSPSL GVTYKLSETT
LLRGYTARGY SLWALTFDDT PAEKVWTSQI GIETTAVPYL WQKLTLFRNQ MWSFTTWNDS
AGIYESDRRM ALGVEYEIRT TPVFNTSIGA GYTFTDTELS KNHDYESGVP RHTVQVSLRY
DDKTFRGVLT GRHIFWNTQP SSEPLYNGDY GGMIWDLHLG ATLVKREERS LEVFFSGRNL
FDGSQTPSNY CVYPGRWFEG GVRVRF