Gene Ppro_1341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_1341 
Symbol 
ID4573828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp1419210 
End bp1420169 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content63% 
IMG OID639755387 
Productresponse regulator receiver modulated diguanylate cyclase 
Protein accessionYP_901019 
Protein GI118579769 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTCCG ACATCTCTTC ACCCAGCGAA CCACAAGCAG CAAGTGCACC CGAACCACTC 
CCGCGTCTGT TGATCGTCGA TGACGAGCCG ACCAACATCC AGAGCCTGTA CGAGATATTC
CGGAGTGATC ACGAGGTGTT CATCGCAACC AGCGCCCTGC AGGGACTGGA GATGTGCGAC
ACCAACCCGC CAGACCTGAT CATGCTGGAC ATCGTCATGC CGAGCATGAA CGGGCTGGAA
ATGTGTCGCC AGCTTAAGAG CGACCAGAGG ACACGGGATA TCCCGGTAAT CTTCGTCACC
GCCTACGGTA ATCCCGAGGA AGAGACCCGC GGACTGGAGG CAGGGGCGGT GGACTTCATC
ATGAAGCCGT TCAACAGCGC GGTGGTCCGC GCCAGGGTCC AGACCCACCT GACCATGAAG
GCCCAGGCGG ACCTGCTCCG CTCCATGGCG TTCATCGACG GCCTGACCGG TGTCGCCAAC
CGCCGCCGCT TCGACGAGAG CCTGGAGGCG GAGTGGCGCC AATGCCGGCG ACACAGGGCC
CCCCTGGCCC TGCTGATGAT CGATATCGAT CACTTCAAGA AGTACAACGA CAGCTATGGC
CACCAGGAGG GGGATGTCTG CCTGCGAAAG ATTGCCACGC TGCTGCGGGA AGAGTTGGGG
CGGCCCCACG ATCTCGTCGC GCGCTACGGC GGCGAGGAGT TCGCCTGTCT TTTGCCGGGG
GTGGACATGG AAGGCGCCAT GTACAAGGCC CAGTCCATCC TGACGGCGCT CCACAGACAG
GCCATTCCCC ACGTATCGTC CGAGACGGCG CCCTTCGTCA CCATCAGCCT CGGGGTGGCG
GTCACGTCTC CGGGACCGGA GCCAAGGCAC GGGCAGCTGG TGGCCACGGC CGACACCCAA
CTCTACAAAG CCAAACAGCA GGGACGCAAC CGCATCTGCG GCCAGGAAGT AACCGACTGA
 
Protein sequence
MTSDISSPSE PQAASAPEPL PRLLIVDDEP TNIQSLYEIF RSDHEVFIAT SALQGLEMCD 
TNPPDLIMLD IVMPSMNGLE MCRQLKSDQR TRDIPVIFVT AYGNPEEETR GLEAGAVDFI
MKPFNSAVVR ARVQTHLTMK AQADLLRSMA FIDGLTGVAN RRRFDESLEA EWRQCRRHRA
PLALLMIDID HFKKYNDSYG HQEGDVCLRK IATLLREELG RPHDLVARYG GEEFACLLPG
VDMEGAMYKA QSILTALHRQ AIPHVSSETA PFVTISLGVA VTSPGPEPRH GQLVATADTQ
LYKAKQQGRN RICGQEVTD