Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_1302 |
Symbol | |
ID | 4573179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | - |
Start bp | 1374226 |
End bp | 1374972 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639755346 |
Product | VanW family protein |
Protein accession | YP_900980 |
Protein GI | 118579730 |
COG category | [V] Defense mechanisms |
COG ID | [COG2720] Uncharacterized vancomycin resistance protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGACCAC ACCGCCACGG CATATTCCTG CTGCTCGTCT GCCTGATCTT TGCTTCCACG GCATGGGGCG AGCCTCCCTT CGGCCAGCTC TGGAGCGGCT TCTCCACCTC GCTCTCCAAC CGCTCGCCTG AACAGCGCAA GAATGCCGCC ATCGCCGGCC AAGCACTGGA CGGCGCCATC ATCCCACCTG GCGGTACGTT CAGCTTCAAC CAACGGGTGG GAGCCCGCGA GCGGGAGAAG GGCTTTCTGC CGGCGCCCTA CCTGACCAGC AACGGCACCC TTGACGACAC CCCCGGCGGC GGCATCTGCC AACTGGCATC CACACTCTAC AACGCCGGGC TGCTGGCAGG GCTGGAGGTG GTGGAACGCC ACCCCCACTC CCGCGCCGTG GCCCACGTTC CTCCCGGTCG CGACGCCACC ATCTCCTCCT GGCGCAAGGA CCTGAGGCTG CGCAACCCCT TCCCCCACCC GCTCAAACTG CGCATCGACT CCGGCAACGA CCGCCTGACC GTCTCCTTCC GTTCTCCGGT GGCCCGGCTG TTTCAGGTGG AAATCCAGTC AAGCCAGATC AGCCAGGAAC CGGAAACCGT GGCCATAAGC GCGGGGAAGT CTGGGCAACC CGGCAGTCAC GGCTTCTCCA CCCGCACCTG GCGGATAACC CACACGAATG GCATCGACAA AAGAGAACTC ATCTCCGAGG ATAACTACCC CGCACCCAGC AGGGTCATCG CCGGTGGCGG AAATTGA
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Protein sequence | MGPHRHGIFL LLVCLIFAST AWGEPPFGQL WSGFSTSLSN RSPEQRKNAA IAGQALDGAI IPPGGTFSFN QRVGAREREK GFLPAPYLTS NGTLDDTPGG GICQLASTLY NAGLLAGLEV VERHPHSRAV AHVPPGRDAT ISSWRKDLRL RNPFPHPLKL RIDSGNDRLT VSFRSPVARL FQVEIQSSQI SQEPETVAIS AGKSGQPGSH GFSTRTWRIT HTNGIDKREL ISEDNYPAPS RVIAGGGN
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