| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1187 |
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| Symbol | |
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| ID | 4574658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | - |
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| Start bp | 1238357 |
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| End bp | 1239013 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639755228 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_900867 |
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| Protein GI | 118579617 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00990405 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTTC GCTCCGCTTT CTTCGACCTG GACGGCACCC TGGTGGACTC CCTGGCCGAT
TTGGCCGACG CGGTTAACCA CATGCTCTCC TCCCTTGACA GGCCCGCCCT CCCCCTGGCC
GAGGTGCGGC TCCTGATCGG CAAGGGGGCC CACAACCTGG TACGCAGGGC GCTGAAGAGC
GATGACGAGC ACATCGTGCA ACAGGGACTG GCCCGGTTCC TGGAGTACAA CCACGGCCAC
ATCGTCGACA AGAGCCGCCT CTACCCCGGT GCACGGGAGG CGCTGGAGAG CCTGGTCGAC
AACGGTATAA CCCTGGCAGC CATCTCCAAC AAGAACGAAG CCTTGAGCAG ACTGATCCTG
GGAGAACTGG GAATTGCCCC CCTCTTCGAA GTCATCTGCG GCGGCAACAG CTTCGCGGAG
ATGAAACCCT CACCACTCCC CCTGCTGAAG ACTCTGGAAC GCCTCGACAT TTCTGCCACG
GAGGCGGTGA TGGCGGGAGA CAGCATCAAC GACATCCAGG CCGGAAGACG GGCCGGCATC
ACCACCATCG GCTGTTGCTG GGGGTACGGC GCCCCGGAAG AACTGCGGCA GGCCGACTAC
CGGGCAGACT CCTGCAGCGA CGTTTCCCGG ATCATCCTGA CCGGAAAGTC GCCATGA
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| Protein sequence | MTVRSAFFDL DGTLVDSLAD LADAVNHMLS SLDRPALPLA EVRLLIGKGA HNLVRRALKS
DDEHIVQQGL ARFLEYNHGH IVDKSRLYPG AREALESLVD NGITLAAISN KNEALSRLIL
GELGIAPLFE VICGGNSFAE MKPSPLPLLK TLERLDISAT EAVMAGDSIN DIQAGRRAGI
TTIGCCWGYG APEELRQADY RADSCSDVSR IILTGKSP
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