Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_1162 |
Symbol | trpA |
ID | 4573852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | - |
Start bp | 1212717 |
End bp | 1213520 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639755200 |
Product | tryptophan synthase subunit alpha |
Protein accession | YP_900843 |
Protein GI | 118579593 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0159] Tryptophan synthase alpha chain |
TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGAC TCACCCACTG CTTCAACGAA CTCAAGCAGC GCAACACAAA GGCGCTGGTC ACCTTCATCA CCGCCGGCGA CCCTGATCTG GCCACTACGC AAGCCATGAT CCCGCTCCTG CAGCAGGCCG GGGCGGACAT CATCGAACTG GGCATGCCCT TTTCCGATCC CATGGCCGAC GGCCCCACCA TCCAGCTCTC ATCGGAACGC GCCCTGGCGG CCAGCACGAC TCTGGAAAGA ATTCTGGCCA TGGTCCGCGC GGTGCGCCGC AGCTGCCAGG TACCCATCGT GCTGATGGGC TACCTGAATC CGATCCACGC CTACGGCTAC GAGCGCTTTG CCAACGATGC CGCCGAGGCC GGCGTTGACG GCGTCCTGGT GGTGGACATG CCCCCCGAGG AGGCGGAGTC GTTCCTGAAC CATGCCAATG CCCGCGACCT GCAGGTGGCC TTCCTGCTGA CACCCACGTC CACCGACAGC CGAATCGCCA CCGTGGGCCG ACTGGGGCGC GGCTTCGTCT ACTACGTGAC GGTCACCGGT GTCACCGGAG CACGCCAGCA GGTATCCACC ACCCTGGGCG GCGAGCTTGC CAAGGTGCGC GCCAAAATCA GCGTCCCCAT TGTGGCCGGC TTCGGCATTT CCACCCCCCA GCAGGCGGCA GACGTTGCCG CCATGGCCGA CGGGGTCGTG GTGGGAAGCG CCCTGGTCAA ACTCTTCCAA CTCCACAGCG GAGAAGAGCT CCGCCAGGAA GTCACGCGCT TTGTCGCCTC GCTCAGACAG GCCATCCCTG GCGGGGCCGC CTGA
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Protein sequence | MNRLTHCFNE LKQRNTKALV TFITAGDPDL ATTQAMIPLL QQAGADIIEL GMPFSDPMAD GPTIQLSSER ALAASTTLER ILAMVRAVRR SCQVPIVLMG YLNPIHAYGY ERFANDAAEA GVDGVLVVDM PPEEAESFLN HANARDLQVA FLLTPTSTDS RIATVGRLGR GFVYYVTVTG VTGARQQVST TLGGELAKVR AKISVPIVAG FGISTPQQAA DVAAMADGVV VGSALVKLFQ LHSGEELRQE VTRFVASLRQ AIPGGAA
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