Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_1078 |
Symbol | |
ID | 4575044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 1128462 |
End bp | 1129733 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639755117 |
Product | TPR repeat-containing protein |
Protein accession | YP_900761 |
Protein GI | 118579511 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.327406 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAATA TTTTACGTTT TTTTGTTCTA ATGCTGGTCG TCTCGCTGCT CTGCGGTTTT CTCTCGGGCG CTGGTGGCGA CGAACGGTTG CGTCGTGGGG ATGAATATCT GCAGGCGCGT CAGTGGGAGG AGGCAATCGA CGAGTATCGA GCGGCACTCT CGGAGCGCCC GGAGTGGCCG GCGGCCCTGG AGCGGCTTGC CGATGCCCTG ATGGCCGCCG GAAAGGACGG GGAGGCAATC AGCACCTATG AACGCCTCCT GCGTCTGGAT GAGTCGCGGG GATCGGTGCG CTACACGCTG GGGGTCCTCC ATGAACGTGG TGGTCGCTTG AAGGAGGCCG AGAGTCAGTA TCGCGAGTGC CTGCGGCAGG AACCGGACAA CGATGATGCG CGGCGCCACC TGGCAGATAT CTATGTTCTG CGCGGCAATC TCACCCTGGC AACGAAAGAG TACCGACAGC TCATCACGCG GCAGCCGGCT AACCCGCTAT TTTACTTCAG GCTGGCCAGG GTTCTGAAGA AGAATCGCAG GTACGGTGAG GCCATCAAGG AGTACCGCCG GGCCATCGAA CTGGCCCCCC ACAACGCCGA ACTGCGTCGA GAGTTGGCGG AGCTTTACTG CAAAAGGGGG ATGGGGGACG GCGCGATCGG CCAGTACCGC GAACTGCTGC GGCTGGACAA CAGGGATACG GAAGCGCGCA ACTCTCTGAT CTCTCTCTAC GTCAAGCTGC ACCGGTACGG AGCCCTGCGC CAACTGTTGC AGGAGGGGGT GGAACGGTTT CCTGACGACC CCGACAGCCA CTTCAGGATG GGGCTGATGC ACGACTTCGC CCGGGAGTAT CAGGCGGCCA TTTCCGAGTA CCGCAAGGCC CTGGCGCTTA AGAACGACCA TGCCAGGGCT TTGAAGGGGC TGGGGAAAAT CTACCTGAAG CTCGGCAAAA CGACCAAGGC CAAGGAGTGT CTGGTGGCTG CGCGCAAGGC GGATCCGGAC CTGCAGGAGG CACAGGAACT CCTGAACAGC CTGCGGGAAC GCCCTGTGGT GAAGAAGAGC CGGAAAAATT CCAGGAAGAG CACGCTCCAG CGGAGTACGA AAAAGAAGTA CCGTTCGTCG CGAACGAGCA GGCGTTCCAA AGTCTCCTCC GTGAAGTCCA AGAAGTCCAA AAAGTCAAGG AAGTCTACAG AGGTCAAGAA GTCCAAGAAG TCAAGGAAGT CTACAGAGGT CAAGAAGATC GGGAAGAAGC GGAACAGCGG TTCATCCGGG GCGAAACGCT GA
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Protein sequence | MINILRFFVL MLVVSLLCGF LSGAGGDERL RRGDEYLQAR QWEEAIDEYR AALSERPEWP AALERLADAL MAAGKDGEAI STYERLLRLD ESRGSVRYTL GVLHERGGRL KEAESQYREC LRQEPDNDDA RRHLADIYVL RGNLTLATKE YRQLITRQPA NPLFYFRLAR VLKKNRRYGE AIKEYRRAIE LAPHNAELRR ELAELYCKRG MGDGAIGQYR ELLRLDNRDT EARNSLISLY VKLHRYGALR QLLQEGVERF PDDPDSHFRM GLMHDFAREY QAAISEYRKA LALKNDHARA LKGLGKIYLK LGKTTKAKEC LVAARKADPD LQEAQELLNS LRERPVVKKS RKNSRKSTLQ RSTKKKYRSS RTSRRSKVSS VKSKKSKKSR KSTEVKKSKK SRKSTEVKKI GKKRNSGSSG AKR
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