| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0968 |
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| Symbol | |
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| ID | 4574253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | + |
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| Start bp | 1010734 |
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| End bp | 1012854 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639755009 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_900654 |
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| Protein GI | 118579404 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000215621 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACACG TTGTAGATGT TGAGTTTGGC GGCAAGATGG TAACAATCTC CACCGGCAAG
ATGGCCAAGC AGGCCAACGG TGCGGTGGTG GTGAAGAGTG GCGACACAAT GGTTCTGGTG
ACCGCCGTGG CCCAGAAAGA GGCCAAAGAG GGGCAGGATT TCTTTCCCCT GACCGTCAAC
TATACCGAGA AGGCCTATGC CGGCGGGAAG ATCCCGGGCA GCTTCTTCAG GCGCGAGGCG
CGCCCCTCCG ACCCGGAGAC GCTGACCTGC CGCTTGATCG ACCGTCCCAT CCGCCCGCTG
TTTCCCGAAA ATTTCTTGAA CGACACCCAG ATCATTGCAA CGGTGGTCTC CGCTGATAAG
GACCACGATC CCCGGATACT CTCCATGCTG GGCGCATCGG CCGCGCTGGA GGTCTCCGAC
ATTCCCTTCC AGGGGCCCAT CGCCGGCGTC AAAGTGGGGC GGGTGGATGG TAGACTGATC
TGCAACCCGA CTGCTGACGA ACTTGAACTG AGCGATATGG AGATCGTGGT CGCCGCCAGC
CGGGATGCCA TCATCATGGT TGAGGGTGAG GCCAGATTCG TCTCCGAGGA TGATATGCTG
GATGCCATCT TCTTCGGCCA TGCGGCGGTA CAGCCGGTTC TGGAGGCCCA GGAAAAGCTG
AAGCAGCTTG CCGGCGTTGC CAAGCGTGAC GTGCCTCCTC CCGTCGTCGA CCAGGCCCTG
CTGGCCAGGG TGCGCGAACT GGCCAGCGAG CGCATGTCAG CCGCGGTCAA GATCAAGAGC
AAGCAGGAAC GCCACAACCA GATCGACCTG ATCACGGCCG AGACGACCGC GTCCCTGGCC
GCTGAGTTCG AGGGGAACGA GAAGCAGATT CGCGCTTTTC TGGGAGACCT GGAGTACGAA
TGCGTTCGCG CCGATGTTCT GAACAGCGGG GTGCGCATCG ATGGCCGCGA CACGGTCACC
ATCCGTCCCA TCGCCACCGA GGCGGGCCTG CTCCCCCGCA CCCACGGCTC GGCCCTGTTC
ACCCGCGGCG AGACCCAGGC CCTGGTGGTC ACCACCCTGG GCACCTCCAG CGACGAACAG
CGCATGGACT CGCTCTACGG TGAATACCGC AAGCGTTTCC TGTTACACTA CAATTTCCCT
CCCTTCTCCG TGGGCGAAAC CAGCTTCCGC CTCGGACCGG GGCGTCGCGA GATCGGCCAC
GGCATGCTCG CCGAGCGGGC GCTCTCGGCG ATCCTCCCCA AGCATGACGA TTTCCCCTAC
ACCATCCGGA TCGTATCCGA GACCCTGGAG AGCAACGGCT CCTCCTCCAT GGCGGCAGTC
TGCGGCGGCT GCATGTCGCT GATGGATGCC GGTGTGCCCA TCTCCGCTCC GGTTGCCGGC
ATCGCCATGG GGTTGATCAA GGAGGGCGAG AAGGTCGCCA TCCTCTCCGA CATCCTGGGT
GACGAGGACC ATCTGGGCGA CATGGACTTC AAGGTGGCCG GCAGCAGCGA CGGGATCACC
GCTCTGCAGA TGGATATCAA GATCGGCGGC GTCACCAGGG AGATCATGCA GAAGGCCCTG
GCCCAGGCCC GCGAGGGGCG ATTGCACATC CTGGGCAAGA TGGCCGAGAC CCTGGGTGCT
CCCCGGCCGG AGATGTCGTC CTTTGCTCCG CGCATCACCA CCATTTGGGT CAAGACCGAC
AAGATCAGGG ACGTTATCGG TACGGGCGGC AAGAATATCC GCAACATCAC CGAGACTACC
GGCGTTACGG TGGATATCGA GGATACGGGT CGCATCAACA TCGCCAGTAC CAGCAAGGAA
GCCTGTGATC TCGCCATCCA GATGATCCGC GGGCTGACCG ACGAGGCCGA AGAAGGCAAG
CTGTACATGG GTATTGTCAA GAAGATCATG GATTTCGGTG CTTTTGTGGA AATCCTGCCC
GGTACCGATG GACTCGTGCA CATCTCCGAA CTGGACACCA AGCGTGTCAA GACGGTTACC
GAGGTGCTCA ACGAGGGTGA CCGGGTACTG GTCAAATGCA TCGGTGTGGA CAAGAACGGC
AAGGTCAAGC TCTCCCGCAA GGAGGCTCTT GGGCTGAACC CGGACGGCAC ACCGGCAACG
GACGCGCCTG CGGGCGAGTA G
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| Protein sequence | MEHVVDVEFG GKMVTISTGK MAKQANGAVV VKSGDTMVLV TAVAQKEAKE GQDFFPLTVN
YTEKAYAGGK IPGSFFRREA RPSDPETLTC RLIDRPIRPL FPENFLNDTQ IIATVVSADK
DHDPRILSML GASAALEVSD IPFQGPIAGV KVGRVDGRLI CNPTADELEL SDMEIVVAAS
RDAIIMVEGE ARFVSEDDML DAIFFGHAAV QPVLEAQEKL KQLAGVAKRD VPPPVVDQAL
LARVRELASE RMSAAVKIKS KQERHNQIDL ITAETTASLA AEFEGNEKQI RAFLGDLEYE
CVRADVLNSG VRIDGRDTVT IRPIATEAGL LPRTHGSALF TRGETQALVV TTLGTSSDEQ
RMDSLYGEYR KRFLLHYNFP PFSVGETSFR LGPGRREIGH GMLAERALSA ILPKHDDFPY
TIRIVSETLE SNGSSSMAAV CGGCMSLMDA GVPISAPVAG IAMGLIKEGE KVAILSDILG
DEDHLGDMDF KVAGSSDGIT ALQMDIKIGG VTREIMQKAL AQAREGRLHI LGKMAETLGA
PRPEMSSFAP RITTIWVKTD KIRDVIGTGG KNIRNITETT GVTVDIEDTG RINIASTSKE
ACDLAIQMIR GLTDEAEEGK LYMGIVKKIM DFGAFVEILP GTDGLVHISE LDTKRVKTVT
EVLNEGDRVL VKCIGVDKNG KVKLSRKEAL GLNPDGTPAT DAPAGE
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