| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0902 |
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| Symbol | |
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| ID | 4572085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | - |
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| Start bp | 947910 |
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| End bp | 950066 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639754944 |
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| Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_900589 |
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| Protein GI | 118579339 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.651526 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGAGC AGACGAATTA CTGCTCCGTC CTGGTGATAG ACGACGACCC GATCATCAGG
CACCTGACAC GCATAACTCT TGAAACCGCG GGGCATAGCG TCAACGACTG CCCGGACGGC
ACGACCGCCC TTGAGACATT CCTGGCAACC GGCCCGGATG TCATCCTGTT GGACGTGATG
CTGCCGGGCA AGGACGGCTT CAGCGTCTGC GCGGAGATTC GCGCGCTTCC CGAGGGACAG
ACCATTCCCA TCGTCATGAT GACCGGCCTG GACGATATCG AGTCGATCCA CAAGGCCTAC
GGCGCGGGCG CCACCGACTT CATCACCAAA CCGCTCAACT GGCAAATTCT GGCCTACCGG
GTCAACTACA TCTTCAGGTC GAGCAGGGCC TTCAGGGACC TGCGCACCAG CGAGGCGCGC
CTGAGCAAGG CCCAGCAACT GGCCCGCATG GGCAGCTGGG AGTGGAACCC GCTGCTGGAT
GTGGTCCAGC TCTCGGAACC GTGCCGGCAG ATCATGGGCA TTGACTCCGC TACCCAGGTT
CGTGACATAG CCTCGCTGAT CGCCCTGGCT CACCCCCTGG GACGGCCGTA CCTGCGTAAG
GGACTGGACG CGCTCATGGA GCGGGGACGC CCCTTAAGTC TCGATTGCCA GACGGCAACC
GCCGACGAGG AGGACAAGCG CTTCATCCAT CTGGAGGCCG AGGAACACAG GGATGCCTCG
GGCCGCATCA CCCTCGTTTC TGGGACGATC CAGGACATCA CGTCCCGAAA GCTGGCAGAA
GAGAAGATCC GCTACCTTGC CTACTACGAC AGCCTGACCG GCCTTCCCAA CCGGGTGCTC
TTCAAGGAAC ACCTCAGGCG CGCCCTGGCG ACCTCGGAAC AACACAAACG CCAGTTGGCC
ATCATGTTGC TCGACCTGGA CCGGTTCAAG GGGATCAACG ACTCGCTGGG ACACGATGCC
GGCGACCTGC TGCTGCAACA GGTGGCAGAC CGCCTGCGCC TGCGCGTGCG CCCCTACGAC
ACGGTCAGCC GCGACAGCGA GGAGCAGAGG GATTCCCTGA TAGCCCGCCT CGGCGGAGAC
GAGTTTACCA TCCTTCTGGA GGGGATCACC ACCCCGGAAG CAGCGGCGCG CGTTGCCAGG
AGAGTCATCG AAGCCCTTGA AGCCCCCTTC GCGCTGAACG GCAACGAGGT CTTCATCTCG
TGCAGCATCG GCATCAGCAT CTACCCCCAT GACGGCACGG ATCTGGAGAT TCTGGTCAAG
AACGCCGACG TGGCCATGTA CTGCGCCAAG GATCTGGGCT GCAGCACGTT CCAGTTCTAC
ACCCAGGAGA TGAACTCCGT CTCGCTCCAG CGCCTGATCC TGGAAACACA CCTGCGCAAG
GCCTTTGAAA AGGAAGAATT CTTTCTCCAC TACCAGCCGC AGATCGATTG CGTCACGAAC
CGGATCATCG GCCTGGAGGC CCTGGCGCGC TGGAACAACC CGGAACTGGG TCTGGTATCG
CCGGGCTCCT TCATTCCCCT GGCCGAGGAA ACGGGACTGA TCATAGCCCT CGATCGCTGG
GTCCTCGCCA CTGTCTGCAA ACAGCTTGAA GCCTGGCAAG CGGCGGGAAT CCCCCTGGTC
CGGGTGGCGG TCAACCTCTC TGCCAGACAC TTCCTCAAGG CAAACCTGAA CAAAACCATC
CAGCAGATCA GGTCGCGCGG CGCCGCGGCC CGTGATCACC TGGACCTGGA AATCACCGAG
GGAATGCTGA TGGAAAACGC CGAGGAGGTG GTCAGCGTCC TGGGCATGCT GCAGGAAACC
GGTGTCAACA TATCCATCGA CGATTTCGGC ACCGGCTACT CATCACTCAG CTACCTGACC
CGCCTGCCGT TCCATACCCT GAAGATCGAC AGGTCGTTTA TCTCCCAGAG CGGCGACAAT
GTGGAAAGCG CCTCCGTCGT CACCGCCATC ATCGCCCTTG CCCACTCCCT GGGCAAAGAG
GTCGTGGCGG AGGGAGTCGA AACCTCTACC CAACTGCAGT TCCTGAAGGA GAACGGCTGC
CGGGTTATAC AGGGATACCT GTTCAGCCGA CCGCTCCCCG AAGACAAGAT CAGGGAACTG
CTCCGGGAGG GCCGCATTCC CGGCGCCGTG GAACCGGTCC GGGAGCATGG TCGGTGA
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| Protein sequence | MIEQTNYCSV LVIDDDPIIR HLTRITLETA GHSVNDCPDG TTALETFLAT GPDVILLDVM
LPGKDGFSVC AEIRALPEGQ TIPIVMMTGL DDIESIHKAY GAGATDFITK PLNWQILAYR
VNYIFRSSRA FRDLRTSEAR LSKAQQLARM GSWEWNPLLD VVQLSEPCRQ IMGIDSATQV
RDIASLIALA HPLGRPYLRK GLDALMERGR PLSLDCQTAT ADEEDKRFIH LEAEEHRDAS
GRITLVSGTI QDITSRKLAE EKIRYLAYYD SLTGLPNRVL FKEHLRRALA TSEQHKRQLA
IMLLDLDRFK GINDSLGHDA GDLLLQQVAD RLRLRVRPYD TVSRDSEEQR DSLIARLGGD
EFTILLEGIT TPEAAARVAR RVIEALEAPF ALNGNEVFIS CSIGISIYPH DGTDLEILVK
NADVAMYCAK DLGCSTFQFY TQEMNSVSLQ RLILETHLRK AFEKEEFFLH YQPQIDCVTN
RIIGLEALAR WNNPELGLVS PGSFIPLAEE TGLIIALDRW VLATVCKQLE AWQAAGIPLV
RVAVNLSARH FLKANLNKTI QQIRSRGAAA RDHLDLEITE GMLMENAEEV VSVLGMLQET
GVNISIDDFG TGYSSLSYLT RLPFHTLKID RSFISQSGDN VESASVVTAI IALAHSLGKE
VVAEGVETST QLQFLKENGC RVIQGYLFSR PLPEDKIREL LREGRIPGAV EPVREHGR
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