| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0873 |
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| Symbol | |
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| ID | 4571768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | - |
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| Start bp | 917445 |
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| End bp | 918155 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639754915 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_900560 |
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| Protein GI | 118579310 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00012242 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGGCTG AATGCGTTAA GCCCGACAGA CTCCTGGACG AGATCGGTGA CATGAAGGCT
GCCCTCCAGG TCAAGTTGCT ACGGGTGCTG CAGGCCAGGG AGTTCGAACC GGTCGGATCG
GCCAAATGCC AGAAAGTAGA TGTGCGCATT GTCGCCGCAA CCAACAGGAA CCTTGAAGAG
CTGGTGGAAA ACGGGAATTT CCGGGAAGAC CTCTATTACC GCCTGTCGGT CATACCGGTC
ACCATACCGC CGCTGCGGGA GCGCAGAGAG GACATCCCAC TCCTGATTCA CAACTTTCTG
ACCATCTTCA ACGACAACAG CAGGTATTCG GTAAAAGGGT TCTCCCGTGA AGCGCTGGAA
ATACTGTGCA ATTACAGCTG GCCGGGCAAT GTCAGGGAAC TTGAGAACCT GGTGGAGCGC
CTGGTGATCA TCAAGAACAG CGGCGTCATC ACCCCCAACG ATCTGCCCGA AAAATACCTC
TCCAGCAACC GGGTCAGGCT CCAGGCGCCA GCGATTCAGG AGGAGAGCAC ACTCCCGGCG
CAAGGCATCT GCCTCAACAC AGTGGTGGAG CAGTTTGAAA ACAACCTGAT CCTCCAGGCC
CTGGCCCGCA CCGGGGGCAA CAAAAAAGAG GCCGCCGAAC TGCTCAACCT GAAAAGGACC
ACCTTGATCG AGAAACTGAA GAAGAAGAAT CTGGTCTTCG TCGAGGAATA G
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| Protein sequence | MTAECVKPDR LLDEIGDMKA ALQVKLLRVL QAREFEPVGS AKCQKVDVRI VAATNRNLEE
LVENGNFRED LYYRLSVIPV TIPPLRERRE DIPLLIHNFL TIFNDNSRYS VKGFSREALE
ILCNYSWPGN VRELENLVER LVIIKNSGVI TPNDLPEKYL SSNRVRLQAP AIQEESTLPA
QGICLNTVVE QFENNLILQA LARTGGNKKE AAELLNLKRT TLIEKLKKKN LVFVEE
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