| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0768 |
|---|
| Symbol | |
|---|
| ID | 4571937 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 815365 |
|---|
| End bp | 818463 |
|---|
| Gene Length | 3099 bp |
|---|
| Protein Length | 1032 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639754811 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_900456 |
|---|
| Protein GI | 118579206 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.330595 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGA CCGATCTGTT CATCCGTCGC CCCGTACTGG CCCTGGTGGT CAACCTGATC
ATCATCATTG CCGGACTGCA GGCTATCCGC TCCCTCAACG TGCGCCAGTA TCCGCGCAGC
GAGAACGCGG CCGTGACCGT GACCACCGTC TACGTGGGGG CCAGCGCCAG CCTGGTGCGC
GGCTTCGTCA CCACGCCGCT GGAGCGCGCC ATTGCCGCGG CGGACGGCAT CGAGTACATG
GAGTCCCAGA GCAGCATGGG GGTCTCCACC ATCAAGGTGC GCCTCAAACT CAACTATGAC
GCCACCAAGG CCCTGGCCGA GATCAGCTCC AAGGTGGATC AGGTGCGCCG TGACCTCCCC
CTGGATGCCG AGGTTCCGGT GATCAACATC GAGTCGGCTG ACAGCGAGTT CGCCTCGGCC
TACTTGAGCT TCACCTGCGA TGCGCTGCAG CAGAACGAGA TCACCGACTA CCTGGTGCGC
GTGGTGCAAC CGCGCCTGTC GGCCGTGAGC GGCGTGCAGC GGGCCGATGT GCTGGGCGCT
CGCACCTTTG CCATGCGTAT CTGGCTCAAG CCGGAACGCA TGGCGGCCCT GAACATCAGT
CCGGTCCAGG TGCGCCAGGC CCTGGTGGCC AACAACTACC TCTCCACCCT GGGCCAGAGC
AAGGGGGCCT ATATCCAGGT CAACCTGACC GCCAACACCA ACATGAATAC GGTGGACGAT
TTCAGGCGCC TGGCCATTCG CGGTCAGAAC GGCGCCATCA TCCGCTTGGA GGATGTGGCC
GATATCGTGC TGGGGGCCGA GGATTACGAC ACCGAGGTGC GCTTCTCGGG GCAGACCGCC
GTGTTCATGG GGATCTGGTC CCTGCCCAAC GCCAACTCCC TGGATGTCAT CAAGCGAGTG
CGGGCCGAGA TGGAGGCAAT CCAGCGCGAA CTCCCCAGCG GCATGCACGC CCGTGTGGCC
TATGACGCCA CCGACTACAT CAACAACGCC ATCCACGAGG TGATCAGCAC CCTCATCGAT
ACCCTGCTGA TCGTGGTGGT GGTCATCTTC CTCTTCCTCG GCTCCTTCCG CTCGGTGCTG
ATCCCGCTGG TGGCCATACC CATCTCCCTG ATCGGCGCCG TGTTCCTGAT CCAGGCCTTC
GGTTTCACCA TCAACCTGCT GACCCTTTTG GCCATCGTGC TCTCCGTCGG CCTGGTGGTG
GACGACGCCA TCGTGGTGGT GGAGAACGTG GAACGCCACA TGGGTGAGGG GAAGAGTCCC
TTGGAGGCGG CCCTTCTGGG GGCTCGGGAA CTGGTCGGCC CGATCATTGC CATGACCATC
ACCCTGGCCG CGGTCTATCT TCCCATCGGC CTGCAAGGGG GACTCACCGG CTCCCTGTTC
CGCGAATTCG CCTTTACCCT GGCCGGTGCC GTGACCATCT CCGGCGTGGT GGCCCTGACC
CTGACGCCGC TCATGTCGTC ACGGCTGCTC AAGCCGGGCA TGGAGGATCA TGGCCTGGCC
GGCCGTATCA GCCGGGGCTT TAACCGGCTT AAGGAGGCCT ACGGCCGGCG GCTGGACGCA
ACCCTGAGGG CGCGCCCCGC CATCTACACC ATCTGGATTG TTGTCAGCCT GCTGACCATC
CCCCTGTTCA CCATGTCTGC CAAGGAGTTG GCCCCCACCG AAGACCAAGG GGTCATCTTC
GGCATCATCG ACGCGGCCGC AAACTCCACC TTGGACCAGA ACAGCCGCTT TGCCGCCGCG
GTTAACCGGG TGTTCCTCAG TATCCCCGAG ACCGATTTTA CCTTCCAGAT CACCCAACCC
AGCTCCGGCA TGGGCGGCAT GGTGGCCAAA CCCTGGGATA AGCGCACACG GAACATCTTC
CAGATCATGC CCGAGGTCTC CCAGAAGCTG CAGGCGATCC CCGGGGTGCA GATCTTTCCG
GTGGTGCCGC CGGCGCTCCC GGGTGGTGGC CAGTTTCCGG TGGAGTTCAT CCTGGCCTCC
ACCGCCGAGA CCTCCGAGAT CCTGGAATTC GCCCAGAAGC TGCAGGTGAA GGCGGCTACG
AGCGGCATGT TTGCCTTTCC CCCCATGATC GACGTCAAGA TCGACCAGCC CCAGACCGAG
TTCGTCATCG ACCGCGACAA GGTGGCTGAC CTGGGGCTCA ACCTGGCGCA GATCGGTGGA
GACTTGGGCG GAATGGTGGG GGGGGATTAC GTGAACCGCT TCGACATCAG CGGCCGCAGC
TACAAGGTCA TCCCCCAGGT GCAACGCAGC GGTCGTCTCA ATCCGGACCA GCTGAAAGAT
ATCTATGTCA CAGGTCCCAG CGGAAAGCTG ATACCCTTAA GCACCATCGC CACCCTGCGG
GAATCGGTAG TTCCCCGGTC GCTCAACCGC TTCCAGCAGC TGAACGCGGT CAAGATCAGC
GCTGTGGCCA TCCGGCCGCT GGATGAGGCG CTGCGCTTCC TGGAGGATGA GGCGGCCAGG
ATCCTGCCCA AGGGGTACGT GCTGGACTAC ACCGGCGAGT CGCGCCAGCT GCGCACGGAG
GGGAACAAGT TTCTGCCGGC CTTTGCTCTG GCCGTGATCC TGATCTTTTT GGTGTTGGCG
GCCCAGTTCA ACAGTTTCCG CGACCCCTTC GTCATCCTGG CCGGGTCGGT GCCGCTGGCC
ATGTTCGGGG CGCTGATCTT CACCTTCCTG AAGATGCCCG ACCCCAACGT CAGCTTCTGG
ACCGGCGGCT GGACCACCAC CCTGAACATC TACTCCCAGG TCGGCTTGGT CACCCTGGTG
GGGCTGGTGG CCAAGAACGG CATCCTGATC GTTGAGTTTG CCAACCAGTT GCAACTGCAG
GGGCGTCCCA AGCTGGAGGC GGTGCGGGAG GCGGCCATGA CCCGCCTGCG GCCGATCCTG
ATGACCACCG CCGCCACCAT TGCCGGCCAC TTCCCCCTGA CCCTGGTGAC CGGCGCCGGC
GCCGCTGCCC GTAACTCCAT CGGCCTGGTG CTGGTGGGGG GGATGTTCAT CGGCACCTTG
TTCACCCTGT TCGTGGTCCC CTCCATCTAC ATGCTGATCG CCCGCGACCA TGGCGGGGAG
CGGGGGCCTG AGGCGGCCAT CGACGCCGTG GAGGCATGA
|
|---|
| Protein sequence | MKLTDLFIRR PVLALVVNLI IIIAGLQAIR SLNVRQYPRS ENAAVTVTTV YVGASASLVR
GFVTTPLERA IAAADGIEYM ESQSSMGVST IKVRLKLNYD ATKALAEISS KVDQVRRDLP
LDAEVPVINI ESADSEFASA YLSFTCDALQ QNEITDYLVR VVQPRLSAVS GVQRADVLGA
RTFAMRIWLK PERMAALNIS PVQVRQALVA NNYLSTLGQS KGAYIQVNLT ANTNMNTVDD
FRRLAIRGQN GAIIRLEDVA DIVLGAEDYD TEVRFSGQTA VFMGIWSLPN ANSLDVIKRV
RAEMEAIQRE LPSGMHARVA YDATDYINNA IHEVISTLID TLLIVVVVIF LFLGSFRSVL
IPLVAIPISL IGAVFLIQAF GFTINLLTLL AIVLSVGLVV DDAIVVVENV ERHMGEGKSP
LEAALLGARE LVGPIIAMTI TLAAVYLPIG LQGGLTGSLF REFAFTLAGA VTISGVVALT
LTPLMSSRLL KPGMEDHGLA GRISRGFNRL KEAYGRRLDA TLRARPAIYT IWIVVSLLTI
PLFTMSAKEL APTEDQGVIF GIIDAAANST LDQNSRFAAA VNRVFLSIPE TDFTFQITQP
SSGMGGMVAK PWDKRTRNIF QIMPEVSQKL QAIPGVQIFP VVPPALPGGG QFPVEFILAS
TAETSEILEF AQKLQVKAAT SGMFAFPPMI DVKIDQPQTE FVIDRDKVAD LGLNLAQIGG
DLGGMVGGDY VNRFDISGRS YKVIPQVQRS GRLNPDQLKD IYVTGPSGKL IPLSTIATLR
ESVVPRSLNR FQQLNAVKIS AVAIRPLDEA LRFLEDEAAR ILPKGYVLDY TGESRQLRTE
GNKFLPAFAL AVILIFLVLA AQFNSFRDPF VILAGSVPLA MFGALIFTFL KMPDPNVSFW
TGGWTTTLNI YSQVGLVTLV GLVAKNGILI VEFANQLQLQ GRPKLEAVRE AAMTRLRPIL
MTTAATIAGH FPLTLVTGAG AAARNSIGLV LVGGMFIGTL FTLFVVPSIY MLIARDHGGE
RGPEAAIDAV EA
|
|---|
| |