Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_0674 |
Symbol | |
ID | 4571913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 713485 |
End bp | 717714 |
Gene Length | 4230 bp |
Protein Length | 1409 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639754717 |
Product | DNA-directed RNA polymerase, beta' subunit |
Protein accession | YP_900363 |
Protein GI | 118579113 |
COG category | [K] Transcription |
COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0573556 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAAGACT ACTTCAGCTT CTTTGATAAA CCCAAAGATC CGCTCCATTT TTCAGCAATT CGGATTTCCG TTTCCTCGCC GGAAAAGATC CGTGAGCGGT CCCACGGCGA AGTAAAAAAG CCAGAGACCA TAAATTACCG GACGTTCAAG CCGGAACGGG ATGGCCTGTT CTGCGCAAAA ATATTTGGCC CGACCAAAGA CTACGAGTGC AATTGCGGCA AATACAAGCG CATGAAGCAC CGCGGTATTA TCTGTGAAAA GTGCGGCGTC GAGGTTATTC CGTCCAAGGT CCGTCGCGAG CGACTCGGAC ATATCGACCT TGCCACACCG GTCGCTCATA TCTGGTTCCT CAAGTCGCTG CCGTCGCGCA TCGGCAACCT GCTTGACATC ACCCTCAAGG ATCTGGAAAA GGTCCTCTAC TTTGAGGCCT TCGTTATCAG CGATCCCAAG AACAGTCCGC TCCAATTCTG CGAGGTGATG TCTGAGGACA AATTTCTCAA GGCTCAGCAG GAATATGGCT ACGATGCCTT TTCAGGCGGC ATGGGTGCCG AGGCCATCCG CGAGTGTCTG AAAGCCATCG ATCTGGACGA ACTCTCCGGT CAGTTGCGCA CCGAGATGAT GGAGTCCACC AGCGAGGCCA AGCGCAAGAA AACTGCCAAG CGCCTGAAGG TGCTGGAGGC ATTCAAGTCT TCGGGAAACA AACCAGAATG GATGATCCTG GAATGTATCC CGGTCCTGCC GCCCGAGTTG CGCCCCCTGG TGCCCCTGGA CGGTGGTCGC TTTGCAACAT CAGACCTCAA CGATCTGTAC CGCCGAGTTA TCAATCGCAA CAACCGTCTG AAGCGATTGG TGGAGCTTCA GGCGCCTGAG GTTATCATCC GCAATGAAAA GCGCATGCTG CAGGAGGCCG TGGATGCTCT GTTCGACAAC GGCCGCCGCG GCAGGGCGAT CGCGGGTCCC AACAAGCGGC CGCTGAAATC CCTCTCCGAC ATGCTCAAGG GAAAATCCGG CCGTTTCCGT CAGAACCTGC TGGGAAAGCG CGTCGATTAT TCCGGACGTT CAGTTATCGT TGTCGGCCCG GAACTGAAGT TGCACCAGTG CGGTCTTCCC AAGAAAATGG CCCTGGAACT GTTCAAGCCT TTCATCTACA ACAAGCTTGA GGAGCGCGGC TACGTCACCA CTATCAAGAG CGCTAAGAAG ATGGTGGAGA AGGAGCGCCC CGAGGTGTGG GACGTGCTGG AGGAGGTTAT CAGGGAGCAC CCGGTCATGC TCAACCGCGC TCCCACACTG CACCGCCTCG GCATCCAGGC CTTTGAGCCG GTATTGATCG AGGGCAAGGC TATCCAGCTT CACCCGCTGG TCTGTACCGC ATTCAACGCC GACTTCGACG GCGACCAGAT GGCGGTACAT CTCCCGCTTT CCGTGGAGAG CCAGGTGGAA GCTCGCGTCC TGATGATGTC CACCAATAAT ATCCTCTCGC CGGCCCACGG CAAGCCGATC ATCGTGCCTT CCCAGGACAT GGTTCTGGGA GCCTACTACA TGACTCGTGA CAGGCGCTTC GAGCGCGTGA TAGACGAGAC GACCGGCAAG GAGAAGATCG ATGCGGAAAG CGGTCTGCCG ATCTACCGCA AGGTAAAGGG CACCGGCAAG GTCTTTTCCG GTCCAGACGA GGTTCGCATC GCCTTTGACG CCGGTGAGGT CGACATGCAG GCCACCGTCA AGGTGCGCAT GAAGAATCTG GTCAGCGACG AAAAACCGCA GATGATCGAC ACCACTGTGG GGCGCGTTAT TCTCAAGGAG ATACTGCCGG ATTCGGTACC GTTTAGCGCC GTAAACAAGG TCATGAACAA GAAGGAACTC TCCAATCTCG TTGATACCTG TTACCGCATG GCGGACAACA AGGAGACGGT CATTCTTGCC GACAAGCTGA AAGACATCGG CTTCCGTTAC GCCAACCTGG CAGGGATTTC CATCTGTCTC GACGACATGG TCATCCCGGA GGGCAAAACC GAGATTCTCA CCAAGGCTGA GGACGAGGTT AAGGAAATTC AGAACCAGTA TACCGAAGGT CTGATTACCG ATGGCGAACG CTACAACAAG GTCATCGACA TCTGGGCTAA AGCTACCGAG GATATTGCCA AGGAGATGCT TGATAACCTT TCCAAGGAAA AATTCTTCGT CGAAGGGGTA GGCGTTTCTG AGGAGGCCTC GTTCAACGCC ATTCATATGA TGGCTGATTC AGGAGCGAGG GGTTCGCACC AGCAGATTCG TCAGCTGGCC GGCATGCGCG GCCTTATGGC TAAGCCGTCG GGCGAGATTA TTGAAACGCC GATTACCGCC AACTTCCGTG AAGGATTGAC GGTGCTGCAG TACTTCATCT CAACCCATGG TGCACGAAAG GGTCTGGCTG ACACAGCCCT CAAAACGGCA AACTCCGGAT ACCTGACCCG TCGTCTGGTG GACGTTGCTC AGGATGCCAT CATTGCTGAG GAAGATTGCG GCACGCTCGA TGGCCTGGTT GTGTCGTCCC TCACCGAGGG GGGCGAGGTT ATCGAGCATA TCGGAGACCG CATTCTCGGC CGCGTGGCTC TGGATGACAT CCTCGACCCG ATTACCGGAG ACGTACTTGT TGCTGCTAAC GAGGATATCG ATGAGAACCT GGTCAAGCGC ATCGAGGATG CAGGACTTGA GAAGGTCAAG ATCCGCTCCG TGCTTACCTG TCAGAGTCGG CGCGGCATCT GCTCCAAATG CTACGGTCGA GACCTGGCGC GCGGTCACAG CGTCAATATG GGTGAGGCCG TGGGAGTCAT TGCGGCGCAG TCCATCGGCG AACCGGGAAC GCAGCTTACC ATGCGTACAT TCCACATCGG CGGTACCGCG TCCCGTCGCG CCGAGCAGAC TTCGCTGGAA TCTCGTACTG ACGGTATTCT CAAGTTTATC AACCTGAACA CGGTTATTAA TGCCGAGGGA CATCATATCG TCATGAACCG CAACGGGGAA ATCGCCGTTG TGGATGAAAC CGGCCGTGAA CGTGAAAAAT ATCTTGTCCT CTATGGAGCG AAAATTAAGA TCGCTCCGGG GGGCGCGGTC ACCCAGGGGG GCATCCTGGC CGAATGGGAT CCCTATACCA TGCCGATTCT TACCGAGTTC AGCGGTAAGG TGAAATTCGG TGACATAGTT GAGGGTGTGA CCATGGAGGA GCAGCTCGAC GAAGTCACCG GCCTGTCCCG CAAGGTCATC ATCGAATCGA AGGACAGCGA CAAGCGCCCG CGCATTGCCA TCAAAGGCAT GGGCGGCGAC TCAGCCGATG CGGTCACCGG TACCATCGGG CGCTACTTCC TCCCCGTCGG CGCAAACATC ACGGTGCAGG ACGATAGCGT CATTAGCGCC GGTGACATCA TCGCCAAGAT TCCCCGGGAA ACGACCAAGA CCAAGGACAT TACCGGTGGT CTTCCGCGAG TGGCCGAGTT GTTCGAGGCT CGCAAGCCGA AGGACTTTGC CGTTATTTCG GAAATTGACG GACGTGTTTC CTATGGTAAG GATGCAAAGG GGAAGCGCAA AGTCATTGTC ACGCCTGAGA TGGGCGAACC GAAGGAATAC CTGATTCCAA AGGGGAAGCA CATCAGCGTG CACGAGGGTG ACCATGTCCG TGCCGGGGAG CCGTTGATGG ATGGCTCATC CAACCCCCAT GATATCCTGC GCGTATTGGG CGTCAAGGAA CTTGCCAAGT ATCTGGTGGA TGAGGTTCAG GAGGTGTACC GCCTGCAGGG GGTTAAGATT AACGACAAGC ATATCGAAGT AATCGTTCGC CAGATGCTGC GGCGTGTTCG CATCAAGGAT GTGGGCGATA CATCACTGCT GGTTGACGAT CAGGTGGAGC GCTGGGTTTT CGAGACTGAG AACCAGAAAG TAATGAATGA GGGCAAGCGT CCCGCCATAG CAGAACCGCT ACTACTCGGC ATTACCAAGG CGTCTCTTTC CACAGAATCG TTTATTTCCG CAGCCTCGTT TCAGGAGACG ACCAAGGTGC TTACGCAGGC GGCTATCGAG GGTAAAGTGG ACTATCTGAG GGGCTTGAAG GAAAATGTCA TTATGGGGCG GTTGATCCCC GCTGGTACGG GGCTTTCAAG CTACCGGAAC ATCCGCATGC TTACGGAAGC CAGTGAACCG GTTGCGCAGG CTGCTGAAAG TGAGGATGTT CCCGATGTGA GTCAGCAGGA AGCAGCATAG
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Protein sequence | MEDYFSFFDK PKDPLHFSAI RISVSSPEKI RERSHGEVKK PETINYRTFK PERDGLFCAK IFGPTKDYEC NCGKYKRMKH RGIICEKCGV EVIPSKVRRE RLGHIDLATP VAHIWFLKSL PSRIGNLLDI TLKDLEKVLY FEAFVISDPK NSPLQFCEVM SEDKFLKAQQ EYGYDAFSGG MGAEAIRECL KAIDLDELSG QLRTEMMEST SEAKRKKTAK RLKVLEAFKS SGNKPEWMIL ECIPVLPPEL RPLVPLDGGR FATSDLNDLY RRVINRNNRL KRLVELQAPE VIIRNEKRML QEAVDALFDN GRRGRAIAGP NKRPLKSLSD MLKGKSGRFR QNLLGKRVDY SGRSVIVVGP ELKLHQCGLP KKMALELFKP FIYNKLEERG YVTTIKSAKK MVEKERPEVW DVLEEVIREH PVMLNRAPTL HRLGIQAFEP VLIEGKAIQL HPLVCTAFNA DFDGDQMAVH LPLSVESQVE ARVLMMSTNN ILSPAHGKPI IVPSQDMVLG AYYMTRDRRF ERVIDETTGK EKIDAESGLP IYRKVKGTGK VFSGPDEVRI AFDAGEVDMQ ATVKVRMKNL VSDEKPQMID TTVGRVILKE ILPDSVPFSA VNKVMNKKEL SNLVDTCYRM ADNKETVILA DKLKDIGFRY ANLAGISICL DDMVIPEGKT EILTKAEDEV KEIQNQYTEG LITDGERYNK VIDIWAKATE DIAKEMLDNL SKEKFFVEGV GVSEEASFNA IHMMADSGAR GSHQQIRQLA GMRGLMAKPS GEIIETPITA NFREGLTVLQ YFISTHGARK GLADTALKTA NSGYLTRRLV DVAQDAIIAE EDCGTLDGLV VSSLTEGGEV IEHIGDRILG RVALDDILDP ITGDVLVAAN EDIDENLVKR IEDAGLEKVK IRSVLTCQSR RGICSKCYGR DLARGHSVNM GEAVGVIAAQ SIGEPGTQLT MRTFHIGGTA SRRAEQTSLE SRTDGILKFI NLNTVINAEG HHIVMNRNGE IAVVDETGRE REKYLVLYGA KIKIAPGGAV TQGGILAEWD PYTMPILTEF SGKVKFGDIV EGVTMEEQLD EVTGLSRKVI IESKDSDKRP RIAIKGMGGD SADAVTGTIG RYFLPVGANI TVQDDSVISA GDIIAKIPRE TTKTKDITGG LPRVAELFEA RKPKDFAVIS EIDGRVSYGK DAKGKRKVIV TPEMGEPKEY LIPKGKHISV HEGDHVRAGE PLMDGSSNPH DILRVLGVKE LAKYLVDEVQ EVYRLQGVKI NDKHIEVIVR QMLRRVRIKD VGDTSLLVDD QVERWVFETE NQKVMNEGKR PAIAEPLLLG ITKASLSTES FISAASFQET TKVLTQAAIE GKVDYLRGLK ENVIMGRLIP AGTGLSSYRN IRMLTEASEP VAQAAESEDV PDVSQQEAA
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