Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_0578 |
Symbol | |
ID | 4572343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | - |
Start bp | 616099 |
End bp | 617676 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639754615 |
Product | glycosyl transferase family protein |
Protein accession | YP_900267 |
Protein GI | 118579017 |
COG category | [R] General function prediction only |
COG ID | [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGATATA TTATAGTTTC GCCTGCATAC GATCACGACT CGGCCTGGAT AGTTGCGCTG CACGAACTAC GGAAATGGCT TATCAGGTCC GGCAAAGAGG CGATGATTCT CGACCTTGCC GCTCCTTGCA GAATCGAAAA TGATGATATC GTCGTTTATC CGGAAGCTGT TCCCGGGAAC CCTTTACATG CAAAACGGGT TGTAAGGTAT CTATTCAATA CTCCCGGCAA GCCTGGCAGC AGCAAGGAAT ACGACCGCAA CGAACTGCTC GTTGCTTATT ATCCCGGCCT TGCCCCCTCT TCCAATGGCG TGACTCTGAC CATCCCCATT ACCGACGATT GCTTTACCCA CAAGGGTTAT GAACGCAGTA TCGACTGTTT TTGGGTTGGC AATGGCAAGA ACACACAGCA TCCGGTTACA AAAAACTGCC TGGAAATAAC GCGTCAATGG GCAGCCCAAC ATGTAGAATT GTCGGAGCTC CTCAACAGAA CAAAAACATT CTATTCATAC GATACTGAAA CCATACTGTT ACATGAGGCA GCGTGCTGCG GATGCGACAT AAGGTTACTC ATTGACGACA AAATTGTTGA TTGCACCTTG TATCAACAGA GTCCGGATGC ATTCAAAACG CAGCTGAGCA CGTTCATTGA ATTGACAGGG ACTCCAGAAA TAGATTCAAC CGGAGAGTCC CTCAAAACCA TTGATAAAAC AGAATCACAT CATCTCACAT CACTCAATTC TCCGATCACA CCGAAGGCAT CCATTATTAT TCCTCTTTAC AACCAGGCTC ATTTAACACG CATGTGCGTG GAAGCGATCA AGGCTTCCGC TCCCATAACC AGCTACGAAC TGGTCTTGAT CGACAACGGT TCCCATGATT GGACACCGGA GTACCTGGCA AGTCTTGGCA CATCGGTCAC CGTAATTACC AACCGTGAAA ACCGTGGATT TGCCGTGGCG TGCAACCAGG GCGCGCGGGC CGCGCGAGGA GATATCCTGG TGTTTCTCAA CAATGACACC GTGCCAGAAC AGGGGTGGCT TGACGAATTG GTTGCGGCAA TCGACAACGG CGAGGCTGAA ATATGCGGTG CGCGGCTCCT CTATCCCGAT GGTCGTTGTC AACACGCCGG AGTCGCCTTT GACGAGCGGG GGTTGGGGTA TCACATTTTT GCGGGCTTTC AGGGCGACTC AGCTCCGGTA CGAGAACGCC GCCTGATGCA GGCGGTAACA GCCGCCTGCA TGGCCATGAG AAAAGGCCTG TTCCATGAAC TGGGAGGCTT CGACGAGGGG TTTCGCAATG GTTTTGAGGA TATAGATCTC TGCCTGCGGG CCGGCCAAAG GGGACATCGC ATCCTCTTTG TTCCCGAAAG CGTTGTGATA CATCATGCCG AGCAGAGTAG CGGGCGCAAG GACAACGAAC TCCACAATCT CAAGCACTTT TTTTCCCGCT GGTTGAACAG GATTCGACAG GACGACATCC CCCTGTACGC CCGTTTTGGT TTTGAAAGCC GCAGAGAGCC GGACGGCAGT TTGAGCATTG TTCCCGCCGA AAAGCCAAAT CAAGACCACC GTTGCTGA
|
Protein sequence | MRYIIVSPAY DHDSAWIVAL HELRKWLIRS GKEAMILDLA APCRIENDDI VVYPEAVPGN PLHAKRVVRY LFNTPGKPGS SKEYDRNELL VAYYPGLAPS SNGVTLTIPI TDDCFTHKGY ERSIDCFWVG NGKNTQHPVT KNCLEITRQW AAQHVELSEL LNRTKTFYSY DTETILLHEA ACCGCDIRLL IDDKIVDCTL YQQSPDAFKT QLSTFIELTG TPEIDSTGES LKTIDKTESH HLTSLNSPIT PKASIIIPLY NQAHLTRMCV EAIKASAPIT SYELVLIDNG SHDWTPEYLA SLGTSVTVIT NRENRGFAVA CNQGARAARG DILVFLNNDT VPEQGWLDEL VAAIDNGEAE ICGARLLYPD GRCQHAGVAF DERGLGYHIF AGFQGDSAPV RERRLMQAVT AACMAMRKGL FHELGGFDEG FRNGFEDIDL CLRAGQRGHR ILFVPESVVI HHAEQSSGRK DNELHNLKHF FSRWLNRIRQ DDIPLYARFG FESRREPDGS LSIVPAEKPN QDHRC
|
| |