| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0517 |
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| Symbol | |
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| ID | 4572888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | + |
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| Start bp | 544559 |
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| End bp | 548092 |
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| Gene Length | 3534 bp |
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| Protein Length | 1177 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639754554 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_900206 |
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| Protein GI | 118578956 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.824032 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGTTT CGTCCGATTT CGCTGCATAC TTCCCCCATG ATATCCAGAT ATCCCGGCAC
TCCTGGCTCT CCCACGACTT GGGCGCCCTC TCGCGGCACA TCTCCGAGCG GGGGATTCCC
GCGATTATCT TCCACCGCCA ACTGGCCCTC AGGTTGAACC GCCGGCATAG CCATGGCAGC
CTTCCGGTGC ATGCCGGTCA GCTCAACCTG TTTGCCGCGC TGCAGACCAT CTTCCGCTAT
CTGATCGACG TTACGGCTGA ACAGGAGTCG CCACGAGTGC TGGAGAACGC CCTGCGCCAG
GTCGGTGTGG AACCGGCCGG AGAAGCGGTG CAGTGTGCCG CCGCTACCTT CGTGGAACTG
TTTCCCCCCT CTGACGTGCT CGCCGGAGCC AGCTCAGTTG ATGCATGGCT CAATCCGGCC
ACCGGCCGTG GCGGTCGACG GCGCACCGTG CTGCGCGAAC TGCTGCTGCT CAGGCTTGCT
GCTGAGAATC CTGCCCTGGA CAGCTTCCGG GAGATCCTCG ACGATGCGCC GCTGGTGGCG
GCCTTGGGGA ACTATCCCCA CCTGGTGACC GCCATGACCA CTGCCCTCTC CCGGGGGCCC
CGGCTGTCCG GATTCGATCT GACGCTGCCC GAAATCCTCT TTGCGCCGAT CAAGGCATCG
CCCGGTTCCC TGGCCGGCCA GGTGGAGTAC ATCCGCGAGC AGTGGGGCGT CTTTCTGCCC
CAGGAGTTGC TGGAGATGCT CACCGGAGCC TGGGACGTGC TGCGCGAAGA GGAGCGCCAG
CGCGGATGGG GTGGGGGAGA GCCGGGGCCG TCGCGGGTAC TGGAGTTCGG CCAGCGAGCG
AATCCGGCAC CGGGAGGGTT CGGCCCTGGT GGCGACTCCG TGCTGGCCGG CTACGACTAT
CCGGAGTACG AACGTTTCTC GCGGGACGAG GACTGGATGT CCAACGTGGT CATGATCGCC
AAGATGGTCT ATGTCTGGCT CGAACAGCTT GGACGTCAGT ACGGCCATCC CATAACCACC
CTGGACCAGG TGCCCGACAG GGAGCTGGAC CGCCTGGCGG GTGCCGGTTT CAGCGCCCTC
TGGCTGATCG GGGTATGGGA ACGTTCCCCC GCCTCCCAGC GCATCAAGCA GATCTGCGGC
AACCAGGAGG CCATCGCCTC TGCCTACTCG CTCTACGACT ACGAGATTTC CGCCGACCTG
GGGGGATGGG AGGCCTTGGC GAACCTGCGT CAGCGGGCGC TCGCGCGCGG CATCCGCCTG
GCAAGCGACA TGGTTCCCAA TCACACCGGG ATCTACTCCC GCTGGGTGCT GGAGCACCCG
GACTGGTTCA TCCAGAGCGA CTACCCCCCC TTTCCCGGCT ACTGTTTCAA CGGCGAGGAC
CTCTCCCTGA GCGGCCACGT GCGCATCCAG GTAGAGGACG GCTACTGGAC CAGGAGCGAT
GCCGCCGTGG TATTCCGTCT GGTGGAGCGC GACAGCGGGC GCACCCGCTA CATTTACCAT
GGCAACGACG GCACCAGCTT TCCCTGGAAC GACACGGCCC AGCTCAACTA CCTGCTCCCC
GATGTGCGCG AGGCGGTCAT CCAGACCATC CTGCATGTGG CGCGCAACTT CCCGATCATC
CGTTTCGACG CCGCCATGAC CCTGGCCAAG AAGCACTTCC AGAGGCTCTG GTTTCCCATC
CGCGGCCTGG GGGGTGGCAT CCCCTCGCGG GCCGAGCATG GCATGAGCCG CGAGGAGTTC
GATGCCGTTT TTCCGGTGGA GTTCTGGAGG GAGGTTGTGG ACCGCGTGGC CGCCGAGGCT
CCCGGCACGC TGCTCCTGGC CGAGGCCTTC TGGATGATGG AGGGGTATTT CGTGCGTACC
CTGGGTATGC ACCGGGTCTA CAACAGCGCC TTCATGAACA TGCTGAAGAA GGAGGAAAAC
GCCAAGTACC GCCAGACCAT CAGGAATGTG CTGGAGTTCA ACCCCGAGGT GCTGAAGCGC
TTCGTCAACT TCATGAACAA TCCGGACGAA AAGACCGCCG TGGAGCAGTT CGGCAGCCAG
GGTAAGTACT TCGGCGCCTG CGTCCTGATG GTGACCATGC CGGGGCTGCC CATGTTCGGC
CATGGCCAGA TCGAGGGCTT CCACGAAAAG TACGGCATGG AGTACAAGCG CGCCTACTGG
GACGAAACGG TTGACCAGGG GCTGCTGCAG GGACACCGCA TGTGGATCTT TCCGCTGCTG
CATCGTCGCG CCCTCTTCTC CGGATCGAAG AATTTCGTGC TCTACGATTT TCACGGCACG
GCCGGGGTCG ACGAGAACGT GTTTGCCTAT TCCAACCGCT GCGGAGAGCA GCGCGCCCTG
GTGCTGTACC ACAACCGCCA TGCCTCCACT TCCGGCTGGA TCAGGGAGTC GGTCCCTTTC
AATGTCACCG AGGGGGGGGG CGAGCCTGAA CTGCGCCGCA CGACCCTGGC CGAGGCTCTG
GATCTGGATG CCGGCGACGG AATCTACTAC GCCTTCCGCG ATCTGGCCGA CGGCCGCCAT
TTTCTGCGCA GCGGGCGGGA ACTGGCCCTC CGTGGGCTCT ACGCCGAGTT GGGCGAGTAC
GAGTTCCATC TGTTCCTGGA TTTTCGTCGC ATCTGCGACG ACCCTGAGCG CTCCTGGGAG
GGGTTGCACC AGGCCTTGAA TGGTCGGGGG GTGGATAATC TGGACGTTGA ACGGTTGCAG
GTGCGCTTTG CCGCCCTGAA CGCCTCCTTT GCCGGGCTCC TGAAGGAACC GCTGCCATTG
GGCGAGCCAG CAGCGGGGGA TGCCACGCAA GCGCCGGCCG GGAATCTGAG CGCCTCCCTT
GATGGCTTCC TCACCGCTCT GGCCGAAGAA CTGAAGGCTT GCGGACAGGC ACCCCGGGTA
ACGTCGGCAG AGCTTACGGC TGAACTCTCC CTGCTGTCCG ATCTTTTGGC ACAGAAGACC
GCATCCCGTG GCGCCCGTCA GTTCCTCTCA GTCATGGCCG ATCGCCTCGC TTCCATTGCC
GGCGCCAGGC TGCTGCTGAC CTGGATGCTC CTGCAGGGGC TGCCCGCTGC CACCCTGGAT
CGCTTTGGCC TGGACCATGG CTTGGCCACG CAACTCCCTC CCGGTGGGGG GGGAGACGTA
GGCGCCGGGG ACGAGCTCCA GCTGCTGCGG GCTTTACTGG AACATGGCGG CCGTGGCTGG
CTGGGACGGG CACCTGCTGT GGAGCGGCTG TTCGCCATTC CCGCCTGTCG ACGCTATCTG
CTGGTTCATG AGAGCGACGG CGTGGTCTGG TTCAACAAGG AACGCTTCGA GGAGCTGGTC
GCATGGCTCT TCATCTGTGG GCTGTGCGCT GCGCTGTCCC GTCGGCCGGT CAATCGGACC
CTGGCCACCT GGTTGGGCGC TGCCGGTCGC GAGCTGAACC GCCTGTCGGA GCTGGCGGCC
CACACCGGCT ATCGCGCCAG CCTGTTCATG GGGGCCTGTG GAAGTACGGC TACAACGGCT
CGCAAGCGAC AGGGGCAGAC ACAGGGTCGG CCGCACACGC CGGAAAAGAG GTAG
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| Protein sequence | MNVSSDFAAY FPHDIQISRH SWLSHDLGAL SRHISERGIP AIIFHRQLAL RLNRRHSHGS
LPVHAGQLNL FAALQTIFRY LIDVTAEQES PRVLENALRQ VGVEPAGEAV QCAAATFVEL
FPPSDVLAGA SSVDAWLNPA TGRGGRRRTV LRELLLLRLA AENPALDSFR EILDDAPLVA
ALGNYPHLVT AMTTALSRGP RLSGFDLTLP EILFAPIKAS PGSLAGQVEY IREQWGVFLP
QELLEMLTGA WDVLREEERQ RGWGGGEPGP SRVLEFGQRA NPAPGGFGPG GDSVLAGYDY
PEYERFSRDE DWMSNVVMIA KMVYVWLEQL GRQYGHPITT LDQVPDRELD RLAGAGFSAL
WLIGVWERSP ASQRIKQICG NQEAIASAYS LYDYEISADL GGWEALANLR QRALARGIRL
ASDMVPNHTG IYSRWVLEHP DWFIQSDYPP FPGYCFNGED LSLSGHVRIQ VEDGYWTRSD
AAVVFRLVER DSGRTRYIYH GNDGTSFPWN DTAQLNYLLP DVREAVIQTI LHVARNFPII
RFDAAMTLAK KHFQRLWFPI RGLGGGIPSR AEHGMSREEF DAVFPVEFWR EVVDRVAAEA
PGTLLLAEAF WMMEGYFVRT LGMHRVYNSA FMNMLKKEEN AKYRQTIRNV LEFNPEVLKR
FVNFMNNPDE KTAVEQFGSQ GKYFGACVLM VTMPGLPMFG HGQIEGFHEK YGMEYKRAYW
DETVDQGLLQ GHRMWIFPLL HRRALFSGSK NFVLYDFHGT AGVDENVFAY SNRCGEQRAL
VLYHNRHAST SGWIRESVPF NVTEGGGEPE LRRTTLAEAL DLDAGDGIYY AFRDLADGRH
FLRSGRELAL RGLYAELGEY EFHLFLDFRR ICDDPERSWE GLHQALNGRG VDNLDVERLQ
VRFAALNASF AGLLKEPLPL GEPAAGDATQ APAGNLSASL DGFLTALAEE LKACGQAPRV
TSAELTAELS LLSDLLAQKT ASRGARQFLS VMADRLASIA GARLLLTWML LQGLPAATLD
RFGLDHGLAT QLPPGGGGDV GAGDELQLLR ALLEHGGRGW LGRAPAVERL FAIPACRRYL
LVHESDGVVW FNKERFEELV AWLFICGLCA ALSRRPVNRT LATWLGAAGR ELNRLSELAA
HTGYRASLFM GACGSTATTA RKRQGQTQGR PHTPEKR
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