Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_0453 |
Symbol | |
ID | 4572981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | - |
Start bp | 476581 |
End bp | 477432 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639754491 |
Product | apurinic endonuclease Apn1 |
Protein accession | YP_900143 |
Protein GI | 118578893 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0648] Endonuclease IV |
TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00920847 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGATT ATCTTGGCGC CCACATGTCC ATAGCAGGCG GCCTGCACCG GGCCATTGAC CGCGCCATGG CGACCGGTTG CGGCGTGCTG CAGATCTTTA CCCGCAACTC CAATCAGTGG AAGGAAAAGA CGCTGAGTGA TGCCGATGTG GCCCTGTTCA GGGAGAAATT CGCGGCTTCC GGCCTGCGCG AGGTGATCTC CCACGACATC TACCTGATCA ACCTGGCTTC CGCTCCGGGG GAGGTTCGCG ACAAGAGCCT GGCGGCCTTC CGGGACGAAC TAGAGACCTG TGCCCGACTA GGCATCGACA GGGTGGTCAT GCACCCCGGA TCGCATCTGT CCGACAGTCC GGAAGCTGCT CTGACGCGGG TGAGCCAGGC CTTCGACCGG CTCTTCCAGG AGGTGCCGCT CTTCCAGGGA AGGGTGCTGC TGGAGACAAC CGCCGGCCAG GGGACCAACC TGGGGCGGAA CTTTCAGGAG CTGCGGACTA TTATCGACGG TTGCCGTTAT CCGGAGCGTT TCGGGGTCTG CTTCGACACC TGCCACACCT TCGCCGCCGG CTACGACATC ACCAGCGAAG AGGGGTACCG CTCCACCAAG GAAGAATTCG ACCAAATCAT CGGGCTCGAC CGACTGGAAT GCTTCCACTT CAACGACTCC AGGAAAGGGC TCGGCTCACG GGTGGACCGC CACGAGCACA TAGGCCAGGG CATGCTGGGG CTCAACCCCT TCCGTTTCAT CTTGAACGAC CAGCGCTTCG CCACGACGCC CAAGATCCTG GAAACCCCCA AGGGGGACAA TGACGAGATG GACGGGATCA ACCTGGGGCT CCTGCGGGGG CTGGTGACCT GA
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Protein sequence | MPDYLGAHMS IAGGLHRAID RAMATGCGVL QIFTRNSNQW KEKTLSDADV ALFREKFAAS GLREVISHDI YLINLASAPG EVRDKSLAAF RDELETCARL GIDRVVMHPG SHLSDSPEAA LTRVSQAFDR LFQEVPLFQG RVLLETTAGQ GTNLGRNFQE LRTIIDGCRY PERFGVCFDT CHTFAAGYDI TSEEGYRSTK EEFDQIIGLD RLECFHFNDS RKGLGSRVDR HEHIGQGMLG LNPFRFILND QRFATTPKIL ETPKGDNDEM DGINLGLLRG LVT
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