| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0429 |
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| Symbol | |
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| ID | 4573008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | + |
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| Start bp | 449899 |
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| End bp | 451194 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639754468 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_900120 |
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| Protein GI | 118578870 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.320682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCGATT CGACCTGCCG CATACTGGAA CAGTTGGCCA AGGGACGTGT GCCGGAGGCC
ATTCCCGACG ATGCCGTCTG CGCCGATGAA CTGCGGCGGT TGGCCGAGTA TCTTGCGGCT
GTACAATGCT TCACCGTTGC GCTGGGCAAC GGTGATCTGA GCACGTCGCT CACGGGCTTC
GGCGGCCCGG TCGCCGGAGG GCTGAAGTCG CTCCAGGCCA GCCTGCGTCA TCTCACCTGG
CAGACGCGGC AGGTTGCGGC GGGAGACTTC AGCCAGCGGG TTGATTTCAT GGGCGAGTTC
GCGGCAAGTT TCAACGCCAT GGTTGTCAGT CTGGCCGAGG CGCGCCGGGA CATGGAGCGC
ATGAATGCCA GGTTACAGGA AGAACTGGCC CAGCAGCTGG CCATGGCGGA GGCGTTGCGG
GAAAACCAGG AGTGCTTCAG GCTGATCACC GAAAATGTCA ACGTGGTTAT CTGGATCATG
GATGCTACCA CGCTGCGCTT CACCTATGTG GGGCCCTATA TCACCAGGCT CCGCGGACTG
AGTGTTGAGG AGGCGCTGGC CGAGACGTTT GAGGAATCCC TGGCCCCTGA TTCACGGGTG
CGGGTCATGG AGAAGATGGC GCAGAACATG GAACGCTTTC GCCAGACCGC TGATGTTTCC
GTCTTCTTCG ACAGCATCGA GGTGGAACAG CTTTGCAGGG ATGGTCGTTG TGTTCACGTT
GAGATGGTGA TCTCAGCCAT TACGGATAAA GCGGGAAAAC TGAAAGATTT CGTAGGAGTC
TCCCGTGACA TTTCGACACG CAAGGCTGTC GAGCAAGAGC TTACCTATCT GAGCAACCAC
GACTCGTTAA CCGGACTCTA TAACCGGGCA TTCTTCGATG CCGAGCTGGA ACGGGCGACC
CATTCCCGGG ACTTTCCCCT GAGCATTATC GCAGCTGACC TGGACGGCCT GAAAACGGTC
AACGACACCC TGGGCCACGC CATGGGCGAC CGGCTGATCA AGGGGGCTGC CGCTGTCCTG
CTGATGGCAT TCCGGGATGA TGACATTATC TCCCGTACGG GGGGCGACGA ATTCGTGGTT
CTGCTCCCCT GCATGGGGAC CGAGGCCGCG ACCGTCCTGC TGGGCCGCAT CAGGGCCTGC
GAGGAGAGCT ACAACGCCAC CGAGGAAGGT CCGGCGGTGA GGATGTCGCT GGGAGTGGCA
ACGGCGCTGA ACAGTGGTGA GGTTGCCCAG GCGCTGGCGG ATGCCGATGC CCGCATGTAT
GCCGACAAGG CGTTGCGAAA GCAGAAGAGG GGATAA
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| Protein sequence | MSDSTCRILE QLAKGRVPEA IPDDAVCADE LRRLAEYLAA VQCFTVALGN GDLSTSLTGF
GGPVAGGLKS LQASLRHLTW QTRQVAAGDF SQRVDFMGEF AASFNAMVVS LAEARRDMER
MNARLQEELA QQLAMAEALR ENQECFRLIT ENVNVVIWIM DATTLRFTYV GPYITRLRGL
SVEEALAETF EESLAPDSRV RVMEKMAQNM ERFRQTADVS VFFDSIEVEQ LCRDGRCVHV
EMVISAITDK AGKLKDFVGV SRDISTRKAV EQELTYLSNH DSLTGLYNRA FFDAELERAT
HSRDFPLSII AADLDGLKTV NDTLGHAMGD RLIKGAAAVL LMAFRDDDII SRTGGDEFVV
LLPCMGTEAA TVLLGRIRAC EESYNATEEG PAVRMSLGVA TALNSGEVAQ ALADADARMY
ADKALRKQKR G
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