| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0405 |
|---|
| Symbol | |
|---|
| ID | 4573034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 416636 |
|---|
| End bp | 417760 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639754444 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_900097 |
|---|
| Protein GI | 118578847 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCTG CTACCCCCTC CGCGGACATC GCTCGCACCA CCCTGGCGGT GCTGTTCATC
GCTATCCTGA TCAGCGCCAG CTTCTGGGTG CTGCGCCCCT TTCTTACGGC GCTGGTCTGG
GCAACCATGA TTGTCATCAC CACCTGGCCG CTGATGCTCT CGCTCCAGAA GTGCCTGTGG
GGAAAGCGGG CACTGGCGGT TGCGGCAATG AGTGCCGCGC TCTTGCTCCT GCTGGTTATC
CCCCTGACCC TGGCAATCGT CAGTATCGTC GAACGCTCCG ATGACATCGT CGGTTGGGCC
AGGTCACTGG CCATGTACAC GCCGGCACCG CCACCGGCCT GGGTGGAGCA GGTCCCTGTG
ATCGGGCCGA AACTGGCCGA ACGCTGGCGC ACTCTGGCGA CGATCGACCC GGTGGAGTTG
TCCGCCCGTC TGGCGCCCCA TGTCAAGGCA ATCGTCGGCT GGATTGTGGC CCAGACAGGG
AGCGTCATGA TGATGGTCGT GCAGTTTCTG CTGACCGTGA TCATCAGCGC GGTGCTCTAC
GCCAGCGGTG AGAAAGCGGC CATGGGGGTC CGCCTCTTTG CCCATCGGCT TGGCGGCAAG
AGCGGTGAAG ACGCCTCCAT CCTGGCCGCA AAGGCCATCC GCGGCGTTGC CCTCGGCGTG
GTCGTCACCG CCCTGGCCCA GGCCCTGCTG GGCGGCATCG GTCTGGCCCT GTCCGGGGTT
CCGGCAGCCA CGCTGCTGAC TGCGGTCATG TTCATCCTCT GCGTGGCCCA GCTCGGTCCC
TCCCTGGTGC TCATCCCCGC CGTTATCTGG CTCTTCTGGA AAGACCAGAC CATGTGGGGC
TCTATCATGG TGGTCTGGGC GGTTGTCGTG GGCACCATGG ACAATTTCAT CCGGCCGATC
CTGATCAAGA AGGGCGCCGA CCTGCCCCTG CTCTTGATCT TTGCCGGGGT GATCGGCGGC
TTGATCGCCT TCGGCGTGAT CGGCCTGTTC ATCGGGCCGG TGATGCTGGC CGTGACCTAC
ACCCTGCTGG TTGCCTGGGT GATGGGGCCG GAGCCGACGG AGGAGGCCGC TGCTGGAAGC
GATTTCGGTA CGGGTCACCC TCAACGGGAA GACAGCGCCC TGTGA
|
|---|
| Protein sequence | MKPATPSADI ARTTLAVLFI AILISASFWV LRPFLTALVW ATMIVITTWP LMLSLQKCLW
GKRALAVAAM SAALLLLLVI PLTLAIVSIV ERSDDIVGWA RSLAMYTPAP PPAWVEQVPV
IGPKLAERWR TLATIDPVEL SARLAPHVKA IVGWIVAQTG SVMMMVVQFL LTVIISAVLY
ASGEKAAMGV RLFAHRLGGK SGEDASILAA KAIRGVALGV VVTALAQALL GGIGLALSGV
PAATLLTAVM FILCVAQLGP SLVLIPAVIW LFWKDQTMWG SIMVVWAVVV GTMDNFIRPI
LIKKGADLPL LLIFAGVIGG LIAFGVIGLF IGPVMLAVTY TLLVAWVMGP EPTEEAAAGS
DFGTGHPQRE DSAL
|
|---|
| |