| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0393 |
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| Symbol | |
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| ID | 4573057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | + |
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| Start bp | 402964 |
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| End bp | 404460 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639754432 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_900085 |
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| Protein GI | 118578835 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00582053 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCTCAA CCGCAAAGAA AACATCTCTG TTAGCGCTTG CAGGCCTGTT GTGTCAGGCC
CTGCCCGCCC TCGCGGCCGA ACCGGCCCAC TCGCTGCTGG CGGAGTTGAG CCGTCCGTCC
ACCCCGCACT CTTCCAGCGC TGAGGCGCCC GCTCTGCTGT CGCAGGTTGA ACGCCAGGGC
GAGAACGTGC CTGGGCTGGT GTCGGAGCTT TTTTCCCTTG AGGAGATCAA GGGCAGGGGG
GTGGAAGGTG TTGAGCTTGA ACTGCCCGAA ATCGATTTGC CTCTGTCCGA TATTCCCCTG
ACCTTCAACA GCAAAGTCGA GTACTTTCTC TATTACTTTC AGACCAATGG CAAACCCTCA
TTTTCTCGCT GGCTCTCCCG CTCATCCCGC TATATCCCGA TGATGAAGGA AATCCTCAGG
GGCAAGGGAC TGCCCGAAGA TCTGGTCTAT GTGGCGATGA TTGAGAGCGG TTTTCACCTG
CAGGCCCGCT CCTGGGCCAA TGCCGTTGGT CCCTGGCAGT TCATCTCCGA AACCGGCCGG
CGCTATGCCC TGCGCATCGA TCAGTGGGTC GATGAACGCA AAGATCCGGT CAAGGCGACC
ACAGCGGCTG CCCTCTATCT GAAGGAACTG TACGGGATGT TCAACGGTGA CTGGTACCTT
GCGGCCGCGG GGTATAACGC CGGTGAGAAC AAGATCCTGC GCGCCATAAA TATGTATAAC
ACCAGCGACT TCTGGGAACT CTCCCGTGGT TCCTATCTCA AGCGGGAGAC CAAGGAGTAT
GTTCCAAAGC TGCTGGCCGC CGCCATCATC GCCAAGGAAC CGGCCCGCTA CGGTTTTTCC
GATATCGCCT ATCTGCCGCC GATCGAGTTT GATACGGTCA CCGTTCCGAC CCGCACCGAC
CTTGACTTGG TGGCCCGACT CACCGGTACC ACCTATGAAG CCATCAAGGA GTTGAACCCC
GATCTGCTCC ACTGGTGTAC GCCCCCCAAC TATCCGGATT TTACCCTCAA GCTTCCCAAG
GGGACCAAGA AGAGATTCAT CGCTGGACTG GCGAACATTT CCGTCGAGCA GCGCTTCACC
GAAAAACTGC TGTATACCCG ATACCAGGCT CGCAGGAACG ATACGATCGC ATCCGTTGCA
CGTCGTTTCA ATGTTTCACC GGAAGCCCTG ACTCAGCTGA ACGGGCTCTC CAAGAGGAGC
CACATTTCCG GCAGATCGCT GATCGTACCG GCCAGGCAGA TGGGTGCTCC CGTTGACCAG
GTGCGAACCG CCTCGGCGCC GAAAAACAGC CCAAAGGGGG AGTACGCCAA ATACCACGTC
GTGAAAAAGG GTGATACGCT GGAGTCCCTC GCCCGGAAAT TCAAGGTTTC CGCGAAGCTC
CTCTCGGCCT GGAACAATCT GAAGGGCAAG ATTGCTCTCA AGCCGGGTCG GCGCATCATC
GTTGCCCGCT TTATCGAAAA AAACGGAGAG ATGGTTCCCA CCGGCAGCAA AGGCTGA
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| Protein sequence | MLSTAKKTSL LALAGLLCQA LPALAAEPAH SLLAELSRPS TPHSSSAEAP ALLSQVERQG
ENVPGLVSEL FSLEEIKGRG VEGVELELPE IDLPLSDIPL TFNSKVEYFL YYFQTNGKPS
FSRWLSRSSR YIPMMKEILR GKGLPEDLVY VAMIESGFHL QARSWANAVG PWQFISETGR
RYALRIDQWV DERKDPVKAT TAAALYLKEL YGMFNGDWYL AAAGYNAGEN KILRAINMYN
TSDFWELSRG SYLKRETKEY VPKLLAAAII AKEPARYGFS DIAYLPPIEF DTVTVPTRTD
LDLVARLTGT TYEAIKELNP DLLHWCTPPN YPDFTLKLPK GTKKRFIAGL ANISVEQRFT
EKLLYTRYQA RRNDTIASVA RRFNVSPEAL TQLNGLSKRS HISGRSLIVP ARQMGAPVDQ
VRTASAPKNS PKGEYAKYHV VKKGDTLESL ARKFKVSAKL LSAWNNLKGK IALKPGRRII
VARFIEKNGE MVPTGSKG
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