| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0293 |
|---|
| Symbol | |
|---|
| ID | 4574886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 289616 |
|---|
| End bp | 291136 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639754330 |
|---|
| Product | glycogen/starch synthases, ADP-glucose type |
|---|
| Protein accession | YP_899985 |
|---|
| Protein GI | 118578735 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0297] Glycogen synthase |
|---|
| TIGRFAM ID | [TIGR02095] glycogen/starch synthases, ADP-glucose type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAACA GCCCGGAAAA ACTCTCGATC CTGTTCGCCG CCTCCGAGGC CGCCCCCTTC
GCCAAGGAGG GGGGGCTCGG CGATGTGGTC GGCGCCCTGC CCAAGTACCT CTCCCGCATG
GGACACGATG CGCGCGTGGT AATCCCGCGC TACTACAGCG TCAATCGAGA AAAATTCGAC
CTGCGCCCCC TACCCGGAAC CCTGGTGGTA CCCATGGGAA TCATGGGCAA CCAGTACTGC
TCGGTCCTAG AGGGGCGCCT TCCGGGGAGC GATGTCCCGA TCTATTTCCT GGAACATGAG
GGCTATTACG GCCGTGCCGG GCTTTATCAG CAGGATGGCG AAGGGTACCT GGACAACGAC
AACCGCTTCG TCTTTCTCTC CAAGGCAGCC CTGGAACTGT GCAAGATGCT CGACTTCAGG
CCGGACGTGG TTCATGCCCA TGACTGGCAT ACCGGCGCCA TCCCGGTCCT GCTGAACACA
TCCTACTTGC ACGACCGCCT GGTGGGTGAC GCTGCGGCGC TGCTGACCCT GCACAACATG
CAGCACCAGG GGAATTTCTA TCCCGGCCTG ATGGAGGTGC TCGGCATCGG CTGGAAGCAC
TTCAACTACC TGGAGATGGA GAAGGATGAC CAGGTCAACC TGCTCAAGGG GGGCATCTAC
CATGCAACCC TGCTCAACAC GGTCAGCGCC GGTTATGCCC GCGAGATCCA GACGCCGGAA
TTCGGCTGGG GACTGGAGGG GGTCGTGCGC GACCGGGGCA GAGACCTGCA CGGCATCCTC
AATGGTGTCG ACTATGAGGA GTGGAACCCC GCAAGCGACC GCTTCATCGC CGCGCACTAT
TCAGCCCGCA CCGTGAAGAA GGGCAAGGCA GCCTGCAAGC GGGACCTGCA GGAGACCATG
GGTCTGCCGC AGCGTGACGA TGTGCCGCTC CTGGGGGTGG TTTCCCGCAT GGTCAAACAG
AAGGGAACCG ACCTCCTGGC CGAGGCCATT CACCGCATCC TGGAGATGGA TCTGCAGTTC
GTCATGGTCG GAAACGGCGA GCCATGGTCC CATTTTTACT TCGGTGACAT CGCCGCCCAG
TACCCGGAAA AATTCGCCTG CCTCATCGGT TACAACGAAG CCCTGGCCCA CAAGGTGGAG
GCGGGATCGG ATTTTTTCGT CATGCCTTCG GCCTTCGAGC CGTGCGGCCT GAACCAGATG
TACAGCCTGG CCTACGGGAC CCCCCCCATC GTGCGCGCCA CCGGCGGCCT GGAGGACAGC
GTGGAGAATT TCGACGAAGA GACGCTCACC GGCACCGGCT TCAAGTTCTG GAGCCACAGC
GCCCAGGCGC TCTTCGACAC CGTCGGCTGG GCGGTCTACA CCTATTACAA CAACCCCCAG
GGGCTGGCAG CCCTGAGGAA AAACGGCATG GCCCAGCGCT TCACCTGGGA CGACGCGGCA
CTGAAGTACG AAGAACTGTA CAGAAAAGCC ATCAAACTCC GGCGCGGCGC CGAGTACTAC
CGCAACCGTT TCGGCGAATG A
|
|---|
| Protein sequence | MMNSPEKLSI LFAASEAAPF AKEGGLGDVV GALPKYLSRM GHDARVVIPR YYSVNREKFD
LRPLPGTLVV PMGIMGNQYC SVLEGRLPGS DVPIYFLEHE GYYGRAGLYQ QDGEGYLDND
NRFVFLSKAA LELCKMLDFR PDVVHAHDWH TGAIPVLLNT SYLHDRLVGD AAALLTLHNM
QHQGNFYPGL MEVLGIGWKH FNYLEMEKDD QVNLLKGGIY HATLLNTVSA GYAREIQTPE
FGWGLEGVVR DRGRDLHGIL NGVDYEEWNP ASDRFIAAHY SARTVKKGKA ACKRDLQETM
GLPQRDDVPL LGVVSRMVKQ KGTDLLAEAI HRILEMDLQF VMVGNGEPWS HFYFGDIAAQ
YPEKFACLIG YNEALAHKVE AGSDFFVMPS AFEPCGLNQM YSLAYGTPPI VRATGGLEDS
VENFDEETLT GTGFKFWSHS AQALFDTVGW AVYTYYNNPQ GLAALRKNGM AQRFTWDDAA
LKYEELYRKA IKLRRGAEYY RNRFGE
|
|---|
| |