| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0253 |
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| Symbol | |
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| ID | 4574898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | - |
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| Start bp | 251608 |
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| End bp | 254055 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639754291 |
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| Product | sex pilus assembly protein |
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| Protein accession | YP_899946 |
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| Protein GI | 118578696 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR02746] type-IV secretion system protein TraC |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGTTG TTTCAGCGTT ACTTGGAAGC GGAGGAGGCG TCACCAGAAA GGAACTGCTC
AGCCTTGTCG AGCGGGACAG ATTCTCCGAG TATTTTCCCT GGATCGCCCA TGATCCAAGG
AAACAGATCT ACCTCAACAC CGACAATACC TTCGGGATGA TGTGGGAGTG CGCTCCCCTG
GCATTTGCGT GTGAGACTAC CATCAGGACC CTTGAAGGTC TATTTCGCGT CAATCTGCCT
GAAGGCTCGA TCATGCAGTT CATTCTGCTG GCCGATCCCT TCGTGAAAAG GATGGTTGAC
ACCTACACCG CCATGAAGAC GCGAGACAGC AAACTGGTGA GGAGTGTCTC TGATAACGTG
TCACGCTTCT TTCAGGAAGG AGCAGAAGGG CTTGACTGTC TGAACGGCAT CCCGGTTCGA
AACTTCCGGA TGTTTTTCTG CGTCAAGTTC CCGGTCAAGA GCAGCCCGCA CGTCAATCTC
GAAGAGGTGT TCGGCACCAT CCAGGAAGTA TTGAAAGGCG CCGGCCTCTC GCCGGTCGCG
GTCGAGCCTG GGCGGCTTCT GGACTGGCTG CGGCGCATGC TGAACGACGA CCCATCCGCC
AATGCCAGTC ACTATGACGA ACGCAATGTC ATCCGCAAGC AGGTACTGCT CGGGACAAAG
GTGGAGAAGA GGTTCTCGTC ACTCAAATTC GGCTCTCGCC ACTTCCGTTG TGTCACTCCC
AAATCCTTTC CCCCTGATGG CGACCCGATC CAGACCAACC AGCTTTTCGG AGGGATCATG
GGCATGGCGA CCGACGCCGA CCAGATTCGG ACGCCATTTT TCTTCACGCT GAACATAGTC
CTGCGCAACC AGAAGAACAG ACTCCACACC AAATGCAATC TGGTCCTGCA GCAGCAGGGG
GTCGGCAGCT TCGCCCCGTC GCTGGCCAGG AAGAAAGACG AATATCTCTG GGCGGTGGAC
GAACTGGAGA GGGGCACCAG GTTTTACCGG ATCATCCCGA TCATGTGGGT CTACGGCAGC
GACGAGTGGC TGGTGAACGA GTCCGTAACC CGGGCCAAAC GGGTCTGGGA GGGGCAAGGG
TATGTCATGC AGGAAGACAA AGGGATTCTC CCCATCCTGT TCATCTCATC TCTTCCATTC
GGGCTCTACG ACCACGGCAG CAATATCGAC ACCCTCGACC GGGACCACAT CATGCCGGTG
GACAGCATCG CCGTCACCTT GCCGATCCAG GGTGATTTCT CGGGTCTCGG CAAGCCGGTC
ATGCTCTTTG CCGGGCGAAA AGGGAACCTG TTCGGTCTCG ATATCTTCAA CAAGGGGGTC
AATAACCACA ACGTCGTGGT CTGTGCTTCC AGCGGAGCGG GGAAAAGTTT CTTCACCAAC
TATCTGGTCT ACAACTACTT CGCCATGAAC TCCAGGATCA GGATCGTGGA TATCGGCGGC
TCCTACAAGA AGATGACCAA GCTGTTCGGA GCCCGTTATC TGGATTTCAG CGAGGATTCC
CAGGTCTGTC TGAATCCCTT TACCACCATC ATCGATCCCG AGTATGACAT CCCGGTCATC
GCCCCCATCG TCGCTCAGAT GGTCTATTCC ACCGGGAAGA CCTTTCCCAG CGAAACCGAG
ATGACCCTCA TCAAGCAGGC CGTGCGCTGG GCATGGCAGC AGGAGGGGAA TGACGCCGGC
ATCGATACCG TCTACGAATA CCTGGCCAAT TTCGACCGCT ACTCCTCAGA AGGAACGGAA
ATCAAAGAGG CTGCCTCCCG GTTGGCCTTC AACCTGGCCG ATTTCAGGAG CGACGGTTCC
TTTGGCCGTT TCTTCAACGG TAAAAGCAGC CTCGACATCT CCAACGACGA GTTCGTGGTT
CTCGAACTGG AGCATCTCAA GTCCAGAAAA GAGCTGTTCC GGGTGGTCAC CCTCCAGGTG
ATCAACGCCG TTACCCAGGA TCTCTACCTT TCCGACAAGT CGGACCAGCG TCTGATCGTC
TTTGACGAGG CGTGGCAATT CCTCGGGGAG AGTTCGACCC TGAAGGAGGT CATCGAGGAA
GGGTACCGCC GGGCCCGGAA GTACTTCGGC AGCTTCACCA TCATCACCCA GTCGGTGCTC
GACATGAAAC TCTTCGGCGG AGTCGGAGAC GTGATCAGAA ACAATTCCGC CTTCAAGTTC
TTCCTGGAAT CGTCGGACTT CGAAAAAGCC CTGGACGAGA AGCTTTTGGA CTACGACGAC
TTCACCATGC GGATTCTCAA GTCCACCAAG AGCAACAAGC CCAAGTATTC GGAGATTTTT
ATGGATACCC CGTTCGGGGT GGGTGTCGGC AGGCTGGTGG TTGATCCTTT TTCCTACTAC
GTGTTCACGT CCGATGCGAG CGAGATCGCG CAGATCGAAG CAATGGTGGA TGGCGGGATG
AGTTACGAGG ATGCGATCCG TGAGATGGTC AAGAAGTATC GCAGCTAG
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| Protein sequence | MGVVSALLGS GGGVTRKELL SLVERDRFSE YFPWIAHDPR KQIYLNTDNT FGMMWECAPL
AFACETTIRT LEGLFRVNLP EGSIMQFILL ADPFVKRMVD TYTAMKTRDS KLVRSVSDNV
SRFFQEGAEG LDCLNGIPVR NFRMFFCVKF PVKSSPHVNL EEVFGTIQEV LKGAGLSPVA
VEPGRLLDWL RRMLNDDPSA NASHYDERNV IRKQVLLGTK VEKRFSSLKF GSRHFRCVTP
KSFPPDGDPI QTNQLFGGIM GMATDADQIR TPFFFTLNIV LRNQKNRLHT KCNLVLQQQG
VGSFAPSLAR KKDEYLWAVD ELERGTRFYR IIPIMWVYGS DEWLVNESVT RAKRVWEGQG
YVMQEDKGIL PILFISSLPF GLYDHGSNID TLDRDHIMPV DSIAVTLPIQ GDFSGLGKPV
MLFAGRKGNL FGLDIFNKGV NNHNVVVCAS SGAGKSFFTN YLVYNYFAMN SRIRIVDIGG
SYKKMTKLFG ARYLDFSEDS QVCLNPFTTI IDPEYDIPVI APIVAQMVYS TGKTFPSETE
MTLIKQAVRW AWQQEGNDAG IDTVYEYLAN FDRYSSEGTE IKEAASRLAF NLADFRSDGS
FGRFFNGKSS LDISNDEFVV LELEHLKSRK ELFRVVTLQV INAVTQDLYL SDKSDQRLIV
FDEAWQFLGE SSTLKEVIEE GYRRARKYFG SFTIITQSVL DMKLFGGVGD VIRNNSAFKF
FLESSDFEKA LDEKLLDYDD FTMRILKSTK SNKPKYSEIF MDTPFGVGVG RLVVDPFSYY
VFTSDASEIA QIEAMVDGGM SYEDAIREMV KKYRS
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