Gene Ppro_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_0004 
Symbol 
ID4573876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp3803 
End bp6211 
Gene Length2409 bp 
Protein Length802 aa 
Translation table11 
GC content59% 
IMG OID639754048 
ProductDNA gyrase, B subunit 
Protein accessionYP_899703 
Protein GI118578453 
COG category[L] Replication, recombination and repair 
COG ID[COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 
TIGRFAM ID[TIGR01059] DNA gyrase, B subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAC ACAACAACGT GACACAGAGC AACGTTGAAG AGTACAGTGC CGATAACATC 
AAGGTACTGG AGGGTCTGGC CGCGGTGCGC AAGCGCCCCG CCATGTACAT CGGCTCCACC
TCCGGTGCGG GCCTGCACCA CCTGGTGTAC GAGATAGTGG ACAACTCCAT CGACGAGGCC
CTGGCTGGTC ATTGCGACAA CATCAGTGTC ACCATCAATG TGGACGGCTC CGTAACCGTC
ATCGACAACG GCCGCGGCAT ACCGACGGAT ATGCATCCCA CCGAAGGGAG GTCGGCTGCC
GAGGTCGTCC TGACCGTACT GCACGCCGGC GGCAAGTTCG ATAATGATTC CTACAAGGTT
TCCGGCGGTC TGCACGGCGT CGGCGTCTCG GTTGTCAACG CGCTTTCAAA ATGGCTGGAA
CTGGAGATCA AGCGTGATGG CAAGATATTC CGCCAATCCT ACCGCCGTGG CGATCCGGTT
GCTCCCCTGG CCGAGACCGG CGCAACCAGG AAGCGGGGCA CCAAAGTCAC CTTCATGCCC
GATGAGGAGA TTTTCGAGAC CACCGAGTTC TCCTTTGACG TTCTCTCCCA GCGCCTGCGC
GAACTGGCCT TTCTCAACGC CGGCGTGCGC ATCGGCATCA GCGACATGCG GGTGGACAAC
AAGTCCCACG AGTTCTACTA CGAGGGGGGG ATCAACTCCT TCGTCGAGTA CCTGAATCGC
AACAAGATCG CCGTGCATCC CAAGCCGATC TACTTCCGGG GAGAGAAGGG GGGGGTGGAG
ACCGAGGTCT CCATGCAGTA CAACGACTCC TTCGACGAGA AAATCTTCTC CTTTGCCAAC
AACATCAATA CCCACGAGGG GGGCACCCAT CTGGTCGGCT TCAAGGCTGC CCTGACCCGC
ACCATGAACG CCTATGCGGC GGCCAACAAT CTGCTCAAGA AGGAAAAGGT CTCCATCTCC
GGTGACGACC TGCGCGAGGG GCTGACCTGC GTCATCTCGG TCAAAATCCC CCAGCCCCAG
TTCGAGGGAC AGACCAAGAC CAAACTGGGC AACTCGGAGG TCAAGGGATA TGTGGAATCC
ATGATCAACG AGAAGCTGGC CCAGTTCCTG GAGGAGAATC CCCAGGTGGC CAAGCGCATC
CTGGAGAAAT CCATCGAGGC AGCCCGGGCA AGGGAGGCTG CCCGCAGGGC CCGCGAGACG
GTGCGACGCA AGGGCGCCCT GGACCTGGGA GGGCTGCCGG GCAAACTGGC CGACTGCCAG
GAGAAGAACC CCGAACATTG CGAACTGTAC CTGGTGGAGG GTGACTCCGC CGGCGGCTCG
GCCAAACAGG GGCGCGACCG CAAGTTCCAG GCCATCCTGC CGCTGAAGGG CAAGATCCTC
AACGTGGAGA AGTCCCGTTT CGACAAGATG ATCTCCTCCC AGGAGATCCG CACCCTGATC
ACCGCCCTGG GCACCGGCAT CGGCAAGGAT GATTTCGATA TCTCCAAGCT GCGCTACGGC
CGGATCATCG TCATGACCGA CGCCGACGTG GACGGCTCCC ACATCCTGAC CCTGCTCTTA
ACCTTCTTCT ACCGCAACAT GAACGAGCTG ATCCAGCGCG GCCATCTGTA CATTGCCCAG
CCGCCGCTCT ACAAGGTCAA GCGGGGCAAG AAGGAGATGT ACCTGAGGAA CGAAGCGGCC
CTGCAGAACT TCCTGCTGGA GGAGGGGGCC GAGGACCTGG TTCTCAGGCT GGAGAAGGGG
GACCGGAAAT ACCTGGGAAA ACAGATCATC CCGGTGATCC GCCAGTTCAT CGACAACCGG
GCCATCTTCG ACAAGGTGGT CAAAAAGGGA ATTTCCCAGG AGTTGCTCTC CATCATCGTC
CGCAGTAACG TGCCGGCTGG CCTGGAAGAG CTTTCCCAGG TAGAGCCGTA TCTGGAGGCC
ATGAAGGAAC TGGCCGAAAA CGGGGAGTAC CAGGTGGAGG AGGAGCGGAT CATCTTCTAC
ATCGGCAATA TCCGCGCCAT CATCGACCAT CAGATCCTGG GCGTTCTGGC CAGCCACGAG
TACGAACTGC TGGTGGAAAA TCACCGCCGG GTGGTGGAAA CCATGGCCGA CGGCCGTGCC
TACATCGAGC AGGAAGCGGG TGGGAAGGTG CTGCTTGAAA CATCCAACCA TGAGGAATTA
CTGGTATATT TTCTTGAAAA CGCCAAGAAG GGTCTGGGCA TCCAGCGCTA CAAAGGTCTG
GGCGAGATGA ACCCGGACCA GCTCTGGGAG ACCACCATGA ATCCGGAGAA CAGGGTGCTC
TTGCAGGTCA AGATCGAGGA TGCCGTGGAA TCGGACGAGA TCTTCACCAT CCTGATGGGC
GACCAGGTGG ACCCGCGCCG CGAATTCATT GAGACCAACG CGCTGAACGT GGTCAACCTG
GACATCTAA
 
Protein sequence
MSEHNNVTQS NVEEYSADNI KVLEGLAAVR KRPAMYIGST SGAGLHHLVY EIVDNSIDEA 
LAGHCDNISV TINVDGSVTV IDNGRGIPTD MHPTEGRSAA EVVLTVLHAG GKFDNDSYKV
SGGLHGVGVS VVNALSKWLE LEIKRDGKIF RQSYRRGDPV APLAETGATR KRGTKVTFMP
DEEIFETTEF SFDVLSQRLR ELAFLNAGVR IGISDMRVDN KSHEFYYEGG INSFVEYLNR
NKIAVHPKPI YFRGEKGGVE TEVSMQYNDS FDEKIFSFAN NINTHEGGTH LVGFKAALTR
TMNAYAAANN LLKKEKVSIS GDDLREGLTC VISVKIPQPQ FEGQTKTKLG NSEVKGYVES
MINEKLAQFL EENPQVAKRI LEKSIEAARA REAARRARET VRRKGALDLG GLPGKLADCQ
EKNPEHCELY LVEGDSAGGS AKQGRDRKFQ AILPLKGKIL NVEKSRFDKM ISSQEIRTLI
TALGTGIGKD DFDISKLRYG RIIVMTDADV DGSHILTLLL TFFYRNMNEL IQRGHLYIAQ
PPLYKVKRGK KEMYLRNEAA LQNFLLEEGA EDLVLRLEKG DRKYLGKQII PVIRQFIDNR
AIFDKVVKKG ISQELLSIIV RSNVPAGLEE LSQVEPYLEA MKELAENGEY QVEEERIIFY
IGNIRAIIDH QILGVLASHE YELLVENHRR VVETMADGRA YIEQEAGGKV LLETSNHEEL
LVYFLENAKK GLGIQRYKGL GEMNPDQLWE TTMNPENRVL LQVKIEDAVE SDEIFTILMG
DQVDPRREFI ETNALNVVNL DI