| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2848 |
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| Symbol | |
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| ID | 6461249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2936334 |
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| End bp | 2938523 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642728996 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_002019611 |
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| Protein GI | 194337817 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAAGT CATCAAAAAA GTTTATAGCA CCGCAGCTTC TGTTTATGCT GCTGATGGCG
GCGGTTCCGC TACCGGCGTT TTCAATGGAA GCGTCAGGCC CGGAAACGGT TGTTACCGCA
CCAGCAGAAA AAAAAGTTCA ATCACTAAGT TCTAAACGGC TGAAAAGCAG TGATACCGCC
GAATTGCTCA GCGGTGAGCC GGGTGTTGCC TTTGCGACAG GTGGCGGCGT TTCAAGTCTG
CCGGTGGTTC GCGGACAGGC GGACGATCGG GTACTGATCT ATGTCGATTG CATGTGTCTG
ACCTCTGCCT GTGCCAACCA CATGAACCCG CCGTTATCCT ATATCGCGGC GGCCAATGTA
AGCGGCATCG GTGTCAGCGC AGGTGTTACG CCAGTCAGTT ACGGTGGCGA CAACATCGGA
GGCATAATCC ATGTTGACTC GGATCAGCCG TTATTTGCCA ATCCCGGGGA GCAGGTTACA
GCAGGTGGTT CGGTTTCCAG CTATTACCGA AGCAATAATC GCGCGATTGG TGGAGCGTTC
TCGGGTACGG TTGCAAACAG CAATCTCAGC TTTGGCGTAA CAGGCGCTAT TGATCATGCC
AGCAACTACA AGGATGGTCA TGGTAATACG GTGACATCTA CTTATTACGA ATCGCGTAAT
CTTGGGGCAA CTTTGGCGCT CAGGGGTGAC AGTAGCCTGT TGACCCTGAA GGCAGGGCAT
CAATTTATTC CTGATCAGGG ATTTGTGAAT CAGTGGATGG ACATGCTTGA GAACAACGCC
TCATTTATCA ATCTTCACTA CAAGAGCGAC TTTGCATGGG GGAAGCTCGA TGCTACAGCT
TACTGGCAGA ATACCTGGCA CAGGATGAAT TCAGGTGAAG ATAAACTGCC AATTAATCTG
AGGATACCAG TAACGATGCC TGATATGCCT ATGGCCACTC GCGGTATAGA CACAGGCTAT
TCATTAAAGA CGGATATTCC CTTTGCAGAA AAGAATATCC TTCGGCTTGG CAACGAATTC
CATCGTTTTA GTCTTAACGA CTGGTGGCCT CCTATCTCTA CGACCCTCGG CACGATGGGT
CCGGATACCT TCCTGAACAT CAATGACGGT TCTCGCGACA GATACGCTTT CTTTGCCGAA
TGGGAGTCGA AGTGGAATAG TAAAGTGACG ACCATTTTCG GTGTTCGCAA TGAACAGGTA
AGGATGGATG CCGGTGATGT GCAGGGATAT AATGCTCAGA ACATGGCGGG TATGATTGTG
ACCAATTATA AACGCGACTC AGAGGCATTC AATGCCGAGG ATCATGCCCG GAGCGACAGT
AATTGGGATG TGACCGCACT GGCCAGGTAT GAAATTACTC CGACGGGTAC CGTTGAAGTT
GGCTATGCCC GCAAGACCCG TTCTCCTAAT CTCTACGAGC GCTATGCATG GTCAACGATG
TGGATGGCAA GCGGGATGGT GAACTGGTTT GGTGATGGCA ATGGTTATGT GGGTAATTTG
GATCTCAGTC CGGAAGTCGC CCATACCCTG AGCATTTCGG CAGACTGGCA TGACAGCGAG
CGGAAGAGCT GGGAGTTGAG GGTAACGCCC TACTATACCT ATGTCAATGA TTACATTGGC
GTGCAAGTGT ATAATACACA GACCTGGACA TGGCCAGGCG GAAGTGAAAC CCGCAAAATA
CTCAAGTTTG TCAATCAGGA TGCAAGGATC TACGGTCTGG ATATTTCCGG TAAACTTGCT
TTGTGGGAGA ATAGCGCTCT TGGTTCCGGA CAACTTCGGG GAAGTCTTGG ATATGTGCAT
GGAACCGATC CCAATACCGG TAGCAGTCTC TATCACATGA TGCCGCTGAA CGGGCATCTT
ACGCTGGAAC AAAATGTTAA AGGATGGAGC AATGCCGTCG AGTTGCAACT TGTTGGCAGA
AAGTCCGAGA CCGATCCCCT TCGTTTTGAA CCGGAAACGG CAGGCTTTGC GCTGGTCAAT
CTGCGTACGT CATACAAATG GAACAACCTG CAGATCGATC TGGGCGTTAC GAACCTGTTC
GACAAGTTCT ATTATCTTCC CCTTGGAGGA ATCAACTACG ACAACTTTCT GGACAGCAAA
CTGCCACCAA CCACGAAAAG GGCGGCAGAT TTCGAGCCGC TGGCAGGTCA GGGTCGTTCG
TTCAATGTGG GTTTAACACA GACTTTCTGA
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| Protein sequence | MTKSSKKFIA PQLLFMLLMA AVPLPAFSME ASGPETVVTA PAEKKVQSLS SKRLKSSDTA
ELLSGEPGVA FATGGGVSSL PVVRGQADDR VLIYVDCMCL TSACANHMNP PLSYIAAANV
SGIGVSAGVT PVSYGGDNIG GIIHVDSDQP LFANPGEQVT AGGSVSSYYR SNNRAIGGAF
SGTVANSNLS FGVTGAIDHA SNYKDGHGNT VTSTYYESRN LGATLALRGD SSLLTLKAGH
QFIPDQGFVN QWMDMLENNA SFINLHYKSD FAWGKLDATA YWQNTWHRMN SGEDKLPINL
RIPVTMPDMP MATRGIDTGY SLKTDIPFAE KNILRLGNEF HRFSLNDWWP PISTTLGTMG
PDTFLNINDG SRDRYAFFAE WESKWNSKVT TIFGVRNEQV RMDAGDVQGY NAQNMAGMIV
TNYKRDSEAF NAEDHARSDS NWDVTALARY EITPTGTVEV GYARKTRSPN LYERYAWSTM
WMASGMVNWF GDGNGYVGNL DLSPEVAHTL SISADWHDSE RKSWELRVTP YYTYVNDYIG
VQVYNTQTWT WPGGSETRKI LKFVNQDARI YGLDISGKLA LWENSALGSG QLRGSLGYVH
GTDPNTGSSL YHMMPLNGHL TLEQNVKGWS NAVELQLVGR KSETDPLRFE PETAGFALVN
LRTSYKWNNL QIDLGVTNLF DKFYYLPLGG INYDNFLDSK LPPTTKRAAD FEPLAGQGRS
FNVGLTQTF
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