Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2798 |
Symbol | |
ID | 6461420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 2889143 |
End bp | 2889409 |
Gene Length | 267 bp |
Protein Length | 88 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642728949 |
Product | regulatory protein, FmdB family |
Protein accession | YP_002019564 |
Protein GI | 194337770 |
COG category | [S] Function unknown |
COG ID | [COG2331] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02605] putative regulatory protein, FmdB family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.821801 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAACCT ATCAGTATCG TTGCAGCAAC TGTGGAAATG AGCTTGAAAT AGTACAGAAA ATAAGCGATG CATCCCTGAC GCTCTGCCCG AAATGTGAAA CAGAGAGCTT CGAGAGGGTC ATCAGCGCCA GCGGTGGATT TTTGCTGAAA GGCTCCGGTT TTTATAAAAC AGACTACGGC AGTGGCAAAC CCGCGCCAGC AGCGCCAACG CCAAGTCCAT GCTCAACCGG AGCCTGCTCG GGCGGAGGCT GTCCTCTGGC CAAATAG
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Protein sequence | MPTYQYRCSN CGNELEIVQK ISDASLTLCP KCETESFERV ISASGGFLLK GSGFYKTDYG SGKPAPAAPT PSPCSTGACS GGGCPLAK
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