Gene Ppha_2788 details

Gene Information

• Locus tag: Ppha_2788
• Symbol: mscL
• ID: 6461896
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelodictyon phaeoclathratiforme BU-1
• Kingdom: Bacteria
• Replicon accession: NC_011060
• Strand: -
• Start bp: 2881783
• End bp: 2882238
• Gene Length: 456 bp
• Protein Length: 151 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 642728941
• Product: large-conductance mechanosensitive channel
• Protein accession: YP_002019556
• Protein GI: 194337762
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1970] Large-conductance mechanosensitive channel
• TIGRFAM ID: [TIGR00220] large conductance mechanosensitive channel protein

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.43697
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTAAAG AGTTTAAAGA GTTTGCCATG AAGGGCAACG TTGTAGATAT GGCAGTTGGT 
ATCATTGTTG GTGGAGCGTT TGGTACGATT GTCAATACTC TTGTCTCCCA GGTGTTGATG 
CCCCCACTGG GTCTGTTGAT TGGAGGAGTC GATTTTACAA ATCTCTACCT TATTCTAAAA 
GAGGGTTCCA AGGCAGCAGC TCCTTACGCC GCTTTGGCCG ATGCGACTGC GGCAGGAGCG 
GTTACGGTCA ATTACGGACT CTTCCTTAAC TCTGTGATCA GTTTTTTAAT CATGGCATTT 
GCAGTGTTCC TGCTTGTCAA AGCTATAAAT ATGCTTCGTC GTGAAGAGAA GGCCCCACCT 
TTGGCTCCGA CAACAAAAGA GTGTCCTTAT TGCCTTTCGA TCGTACCTCT CAAGGCTACC 
CGTTGCTCCA GTTGCACTTC AGAGTTAGGA AAATAA 

 

Protein sequence

MLKEFKEFAM KGNVVDMAVG IIVGGAFGTI VNTLVSQVLM PPLGLLIGGV DFTNLYLILK 
EGSKAAAPYA ALADATAAGA VTVNYGLFLN SVISFLIMAF AVFLLVKAIN MLRREEKAPP 
LAPTTKECPY CLSIVPLKAT RCSSCTSELG K